MGE detailed information
MGE type: IScluster/Tn MGE length: 16149 bp
Accession: NC_017646 Location: 1843061..1859209 Organism: Escherichia coli O7:K1 str. CE10 Replicon: chromosome
Accession: NC_017646 Location: 1843061..1859209 Organism: Escherichia coli O7:K1 str. CE10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CE10_RS09445 () | 1838480..1838686 | - | 207 | WP_000198149.1 | gpW family protein | - |
| CE10_RS09450 () | 1838683..1840608 | - | 1926 | WP_001027279.1 | phage terminase large subunit family protein | - |
| CE10_RS09455 () | 1840583..1841128 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| CE10_RS09460 () | 1841517..1841750 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| CE10_RS09465 () | 1841808..1842218 | + | 411 | WP_001571459.1 | DUF1398 domain-containing protein | - |
| CE10_RS09470 () | 1842370..1842543 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| CE10_RS09475 () | 1842715..1842870 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| CE10_RS30090 () | 1842949..1843014 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| CE10_RS09480 () | 1843061..1844407 | - | 1347 | WP_000483766.1 | IS4 family transposase IS4 | Transposase |
| CE10_RS27940 () | 1844471..1844644 | - | 174 | WP_071881171.1 | cold-shock protein | - |
| CE10_RS09485 () | 1844655..1844867 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CE10_RS09490 () | 1845230..1845727 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CE10_RS09495 () | 1845724..1846257 | - | 534 | WP_001092971.1 | lysozyme | - |
| CE10_RS09500 () | 1846254..1846565 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| CE10_RS09505 () | 1846570..1846785 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CE10_RS09510 () | 1847539..1847754 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CE10_RS09515 () | 1848055..1848267 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CE10_RS30095 () | 1848322..1848411 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| CE10_RS27945 () | 1848689..1848937 | - | 249 | Protein_1822 | antitermination protein | - |
| CE10_RS09520 () | 1849026..1850048 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| CE10_RS09525 () | 1850045..1850827 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| CE10_RS09530 () | 1850892..1851437 | - | 546 | Protein_1825 | antitermination protein Q | - |
| CE10_RS09545 () | 1852682..1853731 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| CE10_RS09550 () | 1853733..1854011 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| CE10_RS09555 () | 1854078..1854329 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| CE10_RS09560 () | 1854546..1854701 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CE10_RS09565 () | 1854773..1855060 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CE10_RS09570 () | 1855060..1855299 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CE10_RS27950 () | 1855324..1855629 | + | 306 | WP_071598992.1 | hypothetical protein | - |
| CE10_RS09575 () | 1855832..1856164 | + | 333 | WP_001301033.1 | protein FlxA | - |
| CE10_RS09600 () | 1859271..1860494 | - | 1224 | WP_000589003.1 | ISNCY family transposase | - |
| CE10_RS30670 () | 1861263..1861550 | - | 288 | Protein_1838 | hypothetical protein | - |
| CE10_RS09615 () | 1862161..1862517 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| CE10_RS09620 () | 1862514..1862936 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| CE10_RS09625 () | 1862977..1863942 | - | 966 | WP_000054512.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|