MGE detailed information
MGE type: Genomic_island MGE length: 98079 bp
Accession: NC_017631 Location: 4941080..5039158 Organism: Escherichia coli ABU 83972 Replicon: chromosome
Accession: NC_017631 Location: 4941080..5039158 Organism: Escherichia coli ABU 83972 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECABU_RS28835 () | 4937298..4938797 | - | 1500 | WP_001304653.1 | phosphoethanolamine transferase | - |
| ECABU_RS24355 () | 4938979..4939719 | - | 741 | WP_001045028.1 | porin family protein | - |
| ECABU_RS27500 () | 4939937..4940305 | - | 369 | Protein_4600 | hypothetical protein | - |
| ECABU_RS24360 () | 4941038..4941384 | + | 347 | Protein_4601 | cobalamin biosynthesis protein CobW | - |
| ECABU_RS24365 () | 4941613..4941915 | - | 303 | WP_001330348.1 | winged helix-turn-helix domain-containing protein | - |
| ECABU_RS24370 () | 4942213..4942554 | + | 342 | WP_001049881.1 | FxLYD domain-containing protein | - |
| ECABU_RS24375 () | 4942858..4943817 | + | 960 | Protein_4604 | IS21-like element ISEc12 family transposase | - |
| ECABU_RS24380 () | 4944170..4944721 | - | 552 | WP_001298062.1 | HTH-type transcriptional regulator PapX | - |
| ECABU_RS24385 () | 4944984..4945988 | - | 1005 | WP_001304641.1 | P fimbria tip G-adhesin PapG-III | - |
| ECABU_RS24390 () | 4946032..4946535 | - | 504 | WP_000620426.1 | P fimbrial tip protein PapF | - |
| ECABU_RS24395 () | 4946610..4947131 | - | 522 | WP_001304639.1 | fimbrial protein | - |
| ECABU_RS24400 () | 4947158..4947694 | - | 537 | WP_000597716.1 | type 1 fimbrial protein | - |
| ECABU_RS24405 () | 4947704..4948285 | - | 582 | WP_000261306.1 | protein papJ | - |
| ECABU_RS24410 () | 4948322..4949056 | - | 735 | WP_000265730.1 | fimbria/pilus periplasmic chaperone | - |
| ECABU_RS24415 () | 4949121..4951631 | - | 2511 | WP_000654939.1 | P fimbrial usher protein PapC | - |
| ECABU_RS24420 () | 4951690..4952277 | - | 588 | WP_001239262.1 | P fimbrial minor subunit PapH | - |
| ECABU_RS24425 () | 4952347..4952916 | - | 570 | WP_000597758.1 | type 1 fimbrial protein | - |
| ECABU_RS24430 () | 4953124..4953438 | - | 315 | WP_000930062.1 | major pilus subunit operon regulatory protein PapB | - |
| ECABU_RS24440 () | 4953843..4954076 | + | 234 | WP_000006211.1 | major pilus subunit operon transcriptional regulator PapI | - |
| ECABU_RS24445 () | 4954579..4954947 | + | 369 | WP_000841005.1 | hypothetical protein | - |
| ECABU_RS27520 () | 4955086..4955295 | + | 210 | WP_001304636.1 | hypothetical protein | - |
| ECABU_RS24455 () | 4955537..4955791 | - | 255 | WP_125080817.1 | LuxR family transcriptional regulator | - |
| ECABU_RS24475 () | 4957745..4958824 | - | 1080 | WP_000821053.1 | type 1 fimbrial protein | - |
| ECABU_RS24480 () | 4958821..4961355 | - | 2535 | WP_001519151.1 | fimbrial biogenesis outer membrane usher protein | - |
| ECABU_RS24485 () | 4961363..4962088 | - | 726 | WP_000943622.1 | fimbria/pilus periplasmic chaperone | - |
| ECABU_RS24490 () | 4962153..4962701 | - | 549 | WP_000695739.1 | fimbrial protein | - |
| ECABU_RS24495 () | 4963273..4963671 | - | 399 | WP_001519150.1 | DoxX family protein | - |
| ECABU_RS24500 () | 4963698..4964915 | - | 1218 | WP_001131384.1 | alpha-hydroxy-acid oxidizing protein | - |
| ECABU_RS24505 () | 4964966..4965514 | - | 549 | WP_000680149.1 | nuclear transport factor 2 family protein | - |
| ECABU_RS24510 () | 4965684..4966325 | + | 642 | WP_001111227.1 | TetR/AcrR family transcriptional regulator | - |
| ECABU_RS24520 () | 4967181..4967369 | - | 189 | Protein_4629 | transposase domain-containing protein | - |
| ECABU_RS24525 () | 4967439..4968572 | + | 1134 | WP_000555409.1 | IS110-like element ISEc45 family transposase | - |
| ECABU_RS24530 () | 4968826..4970217 | - | 1392 | Protein_4631 | IS66 family transposase | - |
| ECABU_RS24535 () | 4970248..4970598 | - | 351 | WP_000624651.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| ECABU_RS24540 () | 4970595..4971035 | - | 441 | WP_050576101.1 | IS66 family insertion sequence hypothetical protein | - |
| ECABU_RS28260 () | 4971370..4972217 | - | 848 | Protein_4634 | IS3 family transposase | - |
| ECABU_RS24555 () | 4972281..4972899 | + | 619 | Protein_4635 | helix-turn-helix domain-containing protein | - |
| ECABU_RS24565 () | 4973137..4976181 | - | 3045 | WP_000528122.1 | cytotoxic necrotizing factor CNF1 | - |
| ECABU_RS24570 () | 4976459..4976830 | - | 372 | WP_001304568.1 | urea transporter | - |
| ECABU_RS24575 () | 4977129..4978565 | - | 1437 | WP_000860471.1 | alpha-hemolysin T1SS ABC transporter subunit HlyD | - |
| ECABU_RS24580 () | 4978584..4980707 | - | 2124 | WP_000376541.1 | type I secretion system permease/ATPase | - |
| ECABU_RS24585 () | 4980778..4983852 | - | 3075 | Protein_4640 | RTX toxin hemolysin HlyA | - |
| ECABU_RS24595 () | 4983864..4984376 | - | 513 | WP_001519143.1 | alpha-hemolysin-activating lysine-acyltransferase HlyC | - |
| ECABU_RS24600 () | 4985560..4985802 | - | 243 | WP_000789515.1 | hypothetical protein | - |
| ECABU_RS24605 () | 4985830..4986600 | - | 771 | WP_000730195.1 | molybdopterin-dependent oxidoreductase | - |
| ECABU_RS24610 () | 4986600..4987199 | - | 600 | WP_001182766.1 | cytochrome b/b6 domain-containing protein | - |
| ECABU_RS24615 () | 4987340..4988059 | + | 720 | WP_001066999.1 | response regulator transcription factor | - |
| ECABU_RS24620 () | 4988060..4989532 | + | 1473 | WP_000995841.1 | HAMP domain-containing histidine kinase | - |
| ECABU_RS28840 () | 4989611..4990379 | - | 769 | Protein_4647 | IS3 family transposase | - |
| ECABU_RS24630 () | 4990377..4990649 | + | 273 | Protein_4648 | DDE-type integrase/transposase/recombinase | - |
| ECABU_RS24635 () | 4990937..4992013 | + | 1077 | WP_000907654.1 | IS110-like element ISEc21 family transposase | - |
| ECABU_RS24640 () | 4992030..4992338 | + | 309 | Protein_4650 | DDE-type integrase/transposase/recombinase | - |
| ECABU_RS28845 () | 4992421..4992678 | + | 258 | WP_000177057.1 | hypothetical protein | - |
| ECABU_RS24650 () | 4993235..4994002 | - | 768 | WP_000175457.1 | Fe(3+) dicitrate ABC transporter ATP-binding protein FecE | - |
| ECABU_RS24655 () | 4994003..4994959 | - | 957 | WP_000684856.1 | Fe(3+) dicitrate ABC transporter permease subunit FecD | - |
| ECABU_RS24660 () | 4994956..4995954 | - | 999 | WP_000125182.1 | iron-dicitrate ABC transporter permease FecC | - |
| ECABU_RS24665 () | 4995951..4996853 | - | 903 | WP_000879158.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| ECABU_RS24670 () | 4996898..4999222 | - | 2325 | WP_000188256.1 | Fe(3+) dicitrate transport protein FecA | - |
| ECABU_RS24675 () | 4999309..5000262 | - | 954 | WP_001068900.1 | fec operon regulator FecR | - |
| ECABU_RS24680 () | 5000259..5000780 | - | 522 | WP_001283626.1 | RNA polymerase sigma factor FecI | - |
| ECABU_RS28275 () | 5001072..5001787 | + | 716 | Protein_4659 | IS1 family transposase | - |
| ECABU_RS28850 () | 5001807..5001872 | - | 66 | Protein_4660 | omptin family outer membrane protease | - |
| ECABU_RS24705 () | 5001929..5003097 | + | 1169 | WP_085962211.1 | IS3 family transposase | - |
| ECABU_RS24710 () | 5003248..5004480 | + | 1233 | WP_000271620.1 | dNTP triphosphohydrolase | - |
| ECABU_RS27585 () | 5004581..5005150 | + | 570 | WP_001304556.1 | hypothetical protein | - |
| ECABU_RS24715 () | 5005567..5006001 | - | 435 | WP_000038249.1 | H-NS histone family protein | - |
| ECABU_RS24720 () | 5006415..5006588 | - | 174 | WP_153274857.1 | hypothetical protein | - |
| ECABU_RS24730 () | 5006894..5007238 | + | 345 | Protein_4666 | prop effector | - |
| ECABU_RS24735 () | 5007257..5007805 | - | 549 | WP_001167422.1 | hypothetical protein | - |
| ECABU_RS29115 () | 5007893..5008051 | - | 159 | WP_000831910.1 | hypothetical protein | - |
| ECABU_RS24740 () | 5008048..5008284 | - | 237 | WP_000958151.1 | AlpA family transcriptional regulator | - |
| ECABU_RS24745 () | 5008353..5008928 | - | 576 | WP_001013353.1 | hypothetical protein | - |
| ECABU_RS29120 () | 5008943..5009092 | + | 150 | WP_162748978.1 | hypothetical protein | - |
| ECABU_RS24750 () | 5009313..5010044 | - | 732 | WP_001075481.1 | inovirus Gp2 family protein | - |
| ECABU_RS24760 () | 5011904..5012923 | + | 1020 | WP_001130585.1 | hypothetical protein | - |
| ECABU_RS27600 () | 5012944..5013138 | - | 195 | WP_001304548.1 | hypothetical protein | - |
| ECABU_RS24765 () | 5013132..5014016 | + | 885 | WP_000010386.1 | 50S ribosome-binding GTPase | - |
| ECABU_RS24775 () | 5014219..5014899 | + | 681 | WP_001282912.1 | WYL domain-containing protein | - |
| ECABU_RS24780 () | 5015050..5015727 | + | 678 | WP_001097418.1 | hypothetical protein | - |
| ECABU_RS24785 () | 5015733..5015966 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| ECABU_RS24790 () | 5016056..5016874 | + | 819 | WP_001175163.1 | DUF945 domain-containing protein | - |
| ECABU_RS24795 () | 5016966..5017451 | + | 486 | WP_000206654.1 | antirestriction protein | - |
| ECABU_RS24800 () | 5017467..5017943 | + | 477 | WP_001186771.1 | RadC family protein | - |
| ECABU_RS24805 () | 5018030..5018251 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| ECABU_RS24810 () | 5018331..5018699 | + | 369 | WP_001285575.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| ECABU_RS24815 () | 5018789..5019166 | + | 378 | WP_001094425.1 | TA system toxin CbtA family protein | Toxin Detail |
| ECABU_RS24820 () | 5019163..5019651 | + | 489 | WP_000761683.1 | hypothetical protein | - |
| ECABU_RS24825 () | 5019663..5019860 | + | 198 | WP_000839272.1 | DUF957 domain-containing protein | - |
| ECABU_RS29125 () | 5019939..5020097 | + | 159 | WP_001467148.1 | hypothetical protein | - |
| ECABU_RS24830 () | 5020561..5021634 | + | 1074 | WP_001304542.1 | integrase arm-type DNA-binding domain-containing protein | - |
| ECABU_RS24835 () | 5021877..5024948 | - | 3072 | WP_000768220.1 | DEAD/DEAH box helicase family protein | - |
| ECABU_RS24840 () | 5024962..5026974 | - | 2013 | WP_000413174.1 | site-specific DNA-methyltransferase | - |
| ECABU_RS27605 () | 5027119..5027277 | - | 159 | WP_011076785.1 | ATP-binding domain-containing protein | - |
| ECABU_RS24845 () | 5027561..5028262 | - | 702 | WP_000081952.1 | DUF4391 domain-containing protein | - |
| ECABU_RS24850 () | 5028259..5031537 | - | 3279 | WP_000419018.1 | DEAD/DEAH box helicase family protein | - |
| ECABU_RS24855 () | 5031537..5032442 | - | 906 | WP_000099232.1 | WYL domain-containing protein | - |
| ECABU_RS24860 () | 5032611..5032862 | - | 252 | WP_000594386.1 | DUF1819 family protein | - |
| ECABU_RS24865 () | 5033156..5033869 | + | 714 | WP_001240357.1 | hypothetical protein | - |
| ECABU_RS28280 () | 5033853..5034889 | - | 1037 | Protein_4697 | IS630-like element ISEc40 family transposase | - |
| ECABU_RS24880 () | 5035183..5035512 | + | 330 | WP_000988223.1 | hypothetical protein | - |
| ECABU_RS28285 () | 5035623..5036045 | - | 423 | WP_077634196.1 | HNH endonuclease | - |
| ECABU_RS27630 () | 5036141..5036263 | + | 123 | WP_001327357.1 | hypothetical protein | - |
| ECABU_RS24890 () | 5036271..5037251 | - | 981 | WP_000991426.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ECABU_RS24895 () | 5037316..5038422 | - | 1107 | WP_001304537.1 | N-acetylneuraminate epimerase | - |
| ECABU_RS24900 () | 5038442..5039158 | - | 717 | WP_001304536.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ECABU_RS29130 () | 5040623..5041171 | + | 549 | Protein_4704 | type 1 fimbria switch DNA invertase FimB | - |
| ECABU_RS24920 () | 5041169..5043145 | + | 1977 | Protein_4705 | fimbrial usher FimD | - |
| ECABU_RS24925 () | 5043155..5043685 | + | 531 | WP_001244821.1 | type 1 fimbria minor subunit FimF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|