MGE detailed information
MGE type: Genomic_island MGE length: 20682 bp
Accession: NC_017628 Location: 264395..285076 Organism: Escherichia coli IHE3034 Replicon: chromosome
Accession: NC_017628 Location: 264395..285076 Organism: Escherichia coli IHE3034 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECOK1_RS01210 () | 260510..260935 | - | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
| ECOK1_RS01215 () | 260940..262424 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| ECOK1_RS01220 () | 262447..262950 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| ECOK1_RS01225 () | 263656..264174 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| ECOK1_RS01235 () | 264395..266377 | + | 1983 | WP_000053636.1 | type VI secretion system tip protein VgrG | - |
| ECOK1_RS01240 () | 266484..267530 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| ECOK1_RS01245 () | 267523..268962 | + | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| ECOK1_RS01250 () | 268937..269227 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| ECOK1_RS27540 () | 269485..270249 | + | 765 | Protein_239 | ISAs1 family transposase | - |
| ECOK1_RS01265 () | 270478..270981 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| ECOK1_RS01270 () | 271075..271563 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| ECOK1_RS28115 () | 271589..271783 | + | 195 | Protein_242 | transposase | - |
| ECOK1_RS01275 () | 271834..272604 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| ECOK1_RS01280 () | 272785..273231 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| ECOK1_RS01285 () | 273274..275718 | - | 2445 | WP_000973137.1 | acyl-CoA dehydrogenase FadE | - |
| ECOK1_RS01290 () | 275958..276536 | + | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| ECOK1_RS01295 () | 276741..277508 | + | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| ECOK1_RS01300 () | 277479..278219 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| ECOK1_RS01305 () | 278531..279280 | + | 750 | WP_000093934.1 | C40 family peptidase | - |
| ECOK1_RS01310 () | 279456..279953 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| ECOK1_RS28715 () | 280036..280194 | - | 159 | WP_014639450.1 | hypothetical protein | - |
| ECOK1_RS01315 () | 280273..281985 | - | 1713 | Protein_252 | flagellar biosynthesis protein FlhA | - |
| ECOK1_RS01320 () | 281957..282742 | + | 786 | WP_000207544.1 | putative lateral flagellar export/assembly protein LafU | - |
| ECOK1_RS01325 () | 282813..283868 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| ECOK1_RS01330 () | 283920..284213 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| ECOK1_RS01335 () | 284216..284614 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| ECOK1_RS01340 () | 284624..285076 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| ECOK1_RS01345 () | 285266..286405 | + | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| ECOK1_RS01350 () | 286402..287016 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| ECOK1_RS01355 () | 287073..288530 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| ECOK1_RS01360 () | 288791..289249 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - () | 289845..289925 | + | 81 | NuclAT_4 | - | - |
| - () | 289845..289925 | + | 81 | NuclAT_4 | - | - |
| - () | 289845..289925 | + | 81 | NuclAT_4 | - | - |
| - () | 289845..289925 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|