NC_0176211130082..1318492

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 188411 bp
Accession: NC_017621        Location: 1130082..1318492         Organism: Streptococcus suis D12       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
SSUD12_RS05610 () 1125867..1126610 - 744 WP_011922238.1 DeoR/GlpR family DNA-binding transcription regulator -
SSUD12_RS05615 () 1126742..1127518 + 777 WP_014638070.1 glycyl-radical enzyme activating protein -
SSUD12_RS05620 () 1128126..1128413 - 288 WP_014638071.1 DUF1905 domain-containing protein -
SSUD12_RS05625 () 1128424..1129077 - 654 WP_014638072.1 DNA alkylation repair protein -
SSUD12_RS05630 () 1129067..1129576 - 510 WP_014638073.1 GNAT family N-acetyltransferase -
SSUD12_RS05635 () 1129577..1130194 - 618 WP_002935402.1 DUF5052 family protein -
SSUD12_RS05640 () 1130352..1131194 + 843 WP_014638074.1 PrsW family intramembrane metalloprotease -
SSUD12_RS05645 () 1131486..1131932 - 447 WP_014638075.1 IS200-IS605 family transposase ISStin10 Transposase
SSUD12_RS05650 () 1132205..1133521 - 1317 WP_014638076.1 FAD-containing oxidoreductase -
SSUD12_RS05655 () 1133737..1134546 + 810 WP_014638077.1 PrsW family intramembrane metalloprotease -
SSUD12_RS05660 () 1134586..1136256 - 1671 WP_014638078.1 formate--tetrahydrofolate ligase -
SSUD12_RS05665 () 1136658..1137353 + 696 WP_024382938.1 phosphopantothenate--cysteine ligase -
SSUD12_RS05670 () 1137346..1137894 + 549 WP_041179215.1 phosphopantothenoylcysteine decarboxylase -
SSUD12_RS05675 () 1137881..1138450 + 570 WP_014638079.1 ECF transporter S component -
SSUD12_RS05680 () 1138541..1140259 + 1719 WP_014638080.1 Phosphoglucomutase VF
SSUD12_RS05685 () 1140591..1141881 + 1291 Protein_1060 IS110 family transposase ISSsu7 Transposase
SSUD12_RS05690 () 1142398..1143008 - 611 Protein_1061 DUF3885 domain-containing protein -
SSUD12_RS05695 () 1143376..1144629 + 1254 WP_014637301.1 IS110 family transposase ISSpn10 Transposase
SSUD12_RS05700 () 1144868..1145743 + 876 WP_014638084.1 CPBP family intramembrane metalloprotease -
SSUD12_RS05705 () 1145761..1146597 - 837 WP_014638085.1 DUF975 family protein -
SSUD12_RS05710 () 1146790..1147671 - 882 WP_014638086.1 DUF975 family protein -
SSUD12_RS05715 () 1147794..1149182 - 1389 WP_011922209.1 amino acid permease -
SSUD12_RS05720 () 1149342..1151003 - 1662 WP_002935371.1 hypothetical protein -
SSUD12_RS05725 () 1151159..1151986 + 828 WP_012775042.1 exodeoxyribonuclease III -
SSUD12_RS05730 () 1152278..1153177 + 900 WP_014638087.1 cation transporter -
SSUD12_RS05735 () 1153194..1153547 - 354 WP_002935368.1 arsenate reductase family protein -
SSUD12_RS05740 () 1153531..1154037 - 507 WP_014638088.1 methylated-DNA--[protein]-cysteine S-methyltransferase -
SSUD12_RS05745 () 1154040..1155221 - 1182 WP_014638089.1 phosphoglycerate dehydrogenase -
SSUD12_RS05750 () 1155595..1156152 - 558 WP_014638090.1 GNAT family acetyltransferase -
SSUD12_RS05755 () 1156152..1157243 - 1092 WP_011922200.1 3-phosphoserine/phosphohydroxythreonine transaminase -
SSUD12_RS05760 () 1157599..1158462 - 864 WP_014638091.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
SSUD12_RS05765 () 1158464..1158781 - 318 WP_002935361.1 DNA replication initiation control protein YabA -
SSUD12_RS05770 () 1158801..1159685 - 885 WP_014638092.1 DNA polymerase III subunit delta' -
SSUD12_RS05775 () 1159682..1160320 - 639 WP_014638093.1 dTMP kinase -
SSUD12_RS05780 () 1160495..1161361 + 867 WP_014638094.1 YitT family protein -
SSUD12_RS05785 () 1161398..1162669 - 1272 WP_002935355.1 toxic anion resistance protein -
SSUD12_RS05790 () 1162675..1163502 - 828 WP_014638095.1 hypothetical protein -
SSUD12_RS05795 () 1163596..1164252 - 657 WP_014638096.1 CBS domain-containing protein -
SSUD12_RS05800 () 1164566..1165141 - 576 Protein_1083 MBL fold metallo-hydrolase -
SSUD12_RS05805 () 1165364..1165579 - 216 WP_014638098.1 hypothetical protein -
SSUD12_RS05810 () 1165681..1166013 - 333 WP_014638099.1 hypothetical protein -
SSUD12_RS05820 () 1166565..1167818 + 1254 Protein_1086 IS110 family transposase ISSpn10 Transposase
SSUD12_RS05825 () 1167946..1169001 - 1056 Protein_1087 Transposon Tn3 resolvase ; Integrase Integrase
SSUD12_RS05830 () 1169001..1170236 - 1236 WP_014638101.1 Transposon gamma-delta resolvase ; Integrase Integrase
SSUD12_RS11700 () 1170294..1170455 - 162 WP_014638102.1 hypothetical protein -
SSUD12_RS05840 () 1170562..1172031 - 1470 WP_014638103.1 N-acetylmuramoyl-L-alanine amidase -
SSUD12_RS05845 () 1172038..1172433 - 396 WP_014638104.1 phage holin family protein -
SSUD12_RS05850 () 1172411..1172779 - 369 WP_014638105.1 hypothetical protein -
SSUD12_RS05855 () 1172785..1172991 - 207 WP_014636351.1 hypothetical protein -
SSUD12_RS05860 () 1173004..1177551 - 4548 WP_014638106.1 phage tail protein -
SSUD12_RS05865 () 1177553..1178275 - 723 WP_014638107.1 phage tail protein -
SSUD12_RS05870 () 1178272..1181130 - 2859 WP_014638108.1 hypothetical protein -
SSUD12_RS05880 () 1181313..1181732 - 420 WP_014638110.1 hypothetical protein -
SSUD12_RS05885 () 1181744..1182313 - 570 WP_014636346.1 hypothetical protein -
SSUD12_RS05890 () 1182315..1182641 - 327 WP_014638111.1 hypothetical protein -
SSUD12_RS05895 () 1182648..1183016 - 369 WP_014638112.1 hypothetical protein -
SSUD12_RS05900 () 1183009..1183347 - 339 WP_014638113.1 head-tail adaptor protein -
SSUD12_RS05905 () 1183347..1183604 - 258 WP_041179267.1 head-tail connector protein -
SSUD12_RS05910 () 1183607..1184812 - 1206 WP_014638115.1 phage major capsid protein -
SSUD12_RS05915 () 1184831..1185526 - 696 WP_014638116.1 ATP-dependent Clp protease proteolytic subunit VF
SSUD12_RS05920 () 1185519..1186802 - 1284 WP_014638117.1 phage portal protein -
SSUD12_RS05925 () 1186860..1187204 - 345 WP_014638118.1 hypothetical protein -
SSUD12_RS05930 () 1187299..1188891 - 1593 WP_014638119.1 terminase large subunit -
SSUD12_RS05935 () 1188888..1189361 - 474 WP_014638120.1 phage terminase small subunit P27 family -
SSUD12_RS05945 () 1189644..1189856 - 213 WP_014638122.1 DUF4314 domain-containing protein -
SSUD12_RS05950 () 1189858..1190106 - 249 WP_014638123.1 hypothetical protein -
SSUD12_RS05955 () 1190179..1191459 - 1281 WP_014638124.1 DNA (cytosine-5-)-methyltransferase -
SSUD12_RS11705 () 1191456..1191836 - 381 Protein_1112 site-specific DNA-methyltransferase -
SSUD12_RS11710 () 1191834..1192577 - 744 Protein_1113 hypothetical protein -
SSUD12_RS11715 () 1192689..1193567 - 879 Protein_1114 DNA modification methylase -
SSUD12_RS05970 () 1193539..1194000 - 462 WP_014638126.1 hypothetical protein -
SSUD12_RS05975 () 1194299..1194664 - 366 WP_014638127.1 HNH endonuclease -
SSUD12_RS05980 () 1194666..1195703 - 1038 WP_014638128.1 methionine adenosyltransferase -
SSUD12_RS05985 () 1195748..1195930 - 183 WP_014638129.1 hypothetical protein -
SSUD12_RS05990 () 1196129..1196632 - 504 WP_014638130.1 hypothetical protein -
SSUD12_RS05995 () 1196625..1198001 - 1377 WP_014638131.1 DEAD/DEAH box helicase -
SSUD12_RS06000 () 1197982..1198263 - 282 WP_014638132.1 VRR-NUC domain-containing protein -
SSUD12_RS06005 () 1198610..1200892 - 2283 WP_014638133.1 hypothetical protein -
SSUD12_RS06010 () 1201290..1201613 + 324 WP_014638134.1 hypothetical protein -
SSUD12_RS06015 () 1201606..1202727 + 1122 WP_014638135.1 DUF2800 domain-containing protein -
SSUD12_RS06020 () 1202732..1203280 + 549 WP_014638136.1 DUF2815 family protein -
SSUD12_RS06025 () 1203515..1204882 + 1368 Protein_1126 hypothetical protein -
SSUD12_RS06030 () 1204886..1205578 + 693 Protein_1127 hypothetical protein -
SSUD12_RS06035 () 1205617..1206186 - 570 WP_014638137.1 hypothetical protein -
SSUD12_RS06040 () 1206599..1207780 + 1182 WP_014638138.1 hypothetical protein -
SSUD12_RS06045 () 1207781..1209070 - 1290 WP_014638139.1 LlaJI family restriction endonuclease -
SSUD12_RS06050 () 1209084..1210856 - 1773 WP_148256226.1 AAA family ATPase -
SSUD12_RS06055 () 1210915..1211982 - 1068 WP_014638141.1 DNA cytosine methyltransferase -
SSUD12_RS06060 () 1211975..1212661 - 687 WP_200858768.1 site-specific DNA-methyltransferase -
SSUD12_RS06065 () 1212705..1212905 - 201 WP_014638143.1 helix-turn-helix transcriptional regulator -
SSUD12_RS06070 () 1213042..1213731 + 690 WP_014638144.1 XRE family transcriptional regulator -
SSUD12_RS06075 () 1213734..1213961 + 228 WP_014638145.1 hypothetical protein -
SSUD12_RS06080 () 1214084..1215499 + 1416 WP_014638147.1 Y-family DNA polymerase -
SSUD12_RS06085 () 1215496..1215864 + 369 WP_014638148.1 hypothetical protein -
SSUD12_RS06090 () 1215851..1216150 + 300 WP_014638149.1 hypothetical protein -
SSUD12_RS06095 () 1216237..1217196 - 960 WP_014638150.1 tagatose-bisphosphate aldolase -
SSUD12_RS06100 () 1217262..1217705 - 444 WP_014638151.1 fructose PTS transporter subunit IIA -
SSUD12_RS06105 () 1217717..1219105 - 1389 WP_014638152.1 PTS fructose transporter subunit IIBC -
SSUD12_RS06110 () 1219106..1220041 - 936 WP_014638153.1 1-phosphofructokinase -
SSUD12_RS06115 () 1220325..1221074 + 750 WP_014638154.1 MurR/RpiR family transcriptional regulator -
SSUD12_RS06120 () 1221203..1221619 - 417 WP_014638155.1 hypothetical protein -
SSUD12_RS06125 () 1221634..1222746 - 1113 WP_014638156.1 Tn3 family transposase TnpR_Tn5403 Transposase
SSUD12_RS06130 () 1222875..1223510 - 636 WP_014638157.1 CpXC domain-containing protein -
SSUD12_RS06135 () 1223662..1225335 - 1674 Protein_1148 ComEC/Rec2 family competence protein -
SSUD12_RS06140 () 1225319..1225981 - 663 WP_014638159.1 helix-hairpin-helix domain-containing protein -
SSUD12_RS06145 () 1226048..1226794 - 747 WP_014638160.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
SSUD12_RS06150 () 1226941..1228386 + 1446 WP_014638161.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase -
SSUD12_RS06155 () 1228538..1229323 + 786 WP_014638162.1 putative siderophore transport system ATP-binding protein YusV VF
SSUD12_RS06160 () 1229336..1230265 + 930 WP_014638163.1 ABC transporter substrate-binding protein -
SSUD12_RS06165 () 1230279..1231304 + 1026 WP_014638164.1 Iron-uptake system permease protein FeuB VF
SSUD12_RS06170 () 1231301..1232302 + 1002 WP_014638165.1 Iron-uptake system permease protein FeuC VF
SSUD12_RS06175 () 1232321..1232800 - 480 WP_014638166.1 glutathione peroxidase -
SSUD12_RS06180 () 1232814..1233530 - 717 WP_014638167.1 rRNA pseudouridine synthase -
SSUD12_RS06185 () 1233669..1234625 + 957 WP_014638168.1 glutathione S-transferase family protein -
SSUD12_RS06190 () 1234698..1235813 + 1116 WP_014638169.1 low temperature requirement protein A -
SSUD12_RS06195 () 1235991..1237248 + 1258 WP_162467804.1 ISL3 family transposase ISSsu6 Transposase
SSUD12_RS06200 () 1237325..1238591 - 1267 Protein_1161 D-alanyl-lipoteichoic acid biosynthesis protein DltD -
SSUD12_RS06205 () 1238584..1238823 - 240 WP_002937198.1 D-alanyl carrier protein VF
SSUD12_RS06210 () 1238866..1240107 - 1242 WP_011922177.1 Peptidoglycan O-acetyltransferase VF
SSUD12_RS06215 () 1240104..1241639 - 1536 WP_014638170.1 D-alanine--D-alanyl carrier protein ligase VF
SSUD12_RS11130 () 1241656..1241781 - 126 WP_079254948.1 teichoic acid D-Ala incorporation-associated protein DltX -
SSUD12_RS06220 () 1242245..1242577 - 333 WP_014638171.1 hypothetical protein -
SSUD12_RS06225 () 1242768..1243133 - 366 WP_014638172.1 hypothetical protein -
SSUD12_RS06230 () 1243575..1243889 - 315 WP_014638173.1 hypothetical protein -
SSUD12_RS06235 () 1244294..1244665 - 372 WP_014638174.1 hypothetical protein -
SSUD12_RS06240 () 1245039..1245257 - 219 WP_014638175.1 hypothetical protein -
SSUD12_RS11720 () 1245317..1245463 - 147 WP_014638176.1 hypothetical protein -
SSUD12_RS06245 () 1245895..1247670 - 1776 WP_041179218.1 S-layer protein -
SSUD12_RS11725 () 1248668..1249080 - 413 Protein_1173 hypothetical protein -
SSUD12_RS06255 () 1249155..1250025 - 871 Protein_1174 alpha/beta hydrolase -
SSUD12_RS11135 () 1250308..1250640 + 333 Protein_1175 MerR family transcriptional regulator -
SSUD12_RS06265 () 1251172..1251876 - 705 WP_014638186.1 glucosamine-6-phosphate deaminase -
SSUD12_RS06270 () 1252225..1253253 + 1029 WP_014638187.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
SSUD12_RS06275 () 1253317..1253790 + 474 WP_002941715.1 arginine repressor -
SSUD12_RS06280 () 1254080..1258351 - 4272 WP_014638188.1 family 16 glycosylhydrolase -
SSUD12_RS06285 () 1258825..1260203 - 1379 Protein_1180 dipeptidase -
SSUD12_RS06290 () 1260322..1261824 - 1503 WP_014638189.1 YfcC family protein -
SSUD12_RS06295 () 1262167..1263114 - 948 WP_014638190.1 carbamate kinase -
SSUD12_RS06300 () 1263232..1264245 - 1014 WP_014638191.1 ornithine carbamoyltransferase -
SSUD12_RS06305 () 1264264..1264704 - 441 WP_002941721.1 GNAT family N-acetyltransferase -
SSUD12_RS06310 () 1264704..1265936 - 1233 WP_024386613.1 arginine deiminase -
SSUD12_RS06315 () 1266195..1266890 - 696 WP_014638193.1 Crp/Fnr family transcriptional regulator -
SSUD12_RS06320 () 1267548..1268465 - 918 WP_014638194.1 DNA-binding protein WhiA -
SSUD12_RS06325 () 1268462..1269436 - 975 WP_002937257.1 YvcK family protein -
SSUD12_RS06330 () 1269433..1270320 - 888 WP_014638195.1 RNase adapter RapZ -
SSUD12_RS06335 () 1270342..1270719 - 378 WP_002937263.1 RidA family protein -
SSUD12_RS11155 () 1271042..1272335 - 1294 Protein_1191 IS4 family transposase -
SSUD12_RS06345 () 1272420..1273739 - 1320 WP_014638197.1 MATE family efflux transporter -
SSUD12_RS06350 () 1273966..1275312 - 1347 WP_014638198.1 asparagine--tRNA ligase -
SSUD12_RS06355 () 1275327..1276508 - 1182 WP_041179219.1 pyridoxal phosphate-dependent aminotransferase -
SSUD12_RS06360 () 1276505..1277002 - 498 WP_014638200.1 DUF5590 domain-containing protein -
SSUD12_RS06365 () 1277304..1277753 + 450 WP_014638201.1 HTH-type transcriptional regulator MhqR VF
SSUD12_RS06370 () 1277816..1278361 + 546 WP_014638202.1 NAD(P)H-dependent oxidoreductase -
SSUD12_RS06375 () 1278461..1279573 - 1113 WP_014638203.1 UDP-galactopyranose mutase VF
SSUD12_RS06380 () 1279847..1280260 - 414 Protein_1199 IS982 family transposase ISSpy2 Transposase
SSUD12_RS06385 () 1280868..1281098 - 231 WP_014638205.1 hypothetical protein -
SSUD12_RS06390 () 1281114..1281323 - 210 WP_014638206.1 Blp family class II bacteriocin -
SSUD12_RS06395 () 1281340..1281591 - 252 WP_014638207.1 bacteriocin -
SSUD12_RS06400 () 1281890..1284043 + 2154 WP_014638208.1 Lactococcin-G-processing and transport ATP-binding protein LagD VF
SSUD12_RS06405 () 1284054..1285412 + 1359 WP_014638209.1 bacteriocin secretion accessory protein -
SSUD12_RS11510 () 1285514..1285675 + 162 WP_014638210.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
SSUD12_RS06410 () 1285843..1287186 - 1344 WP_014638211.1 hypothetical protein VF
SSUD12_RS06415 () 1287197..1287937 - 741 WP_014638212.1 response regulator transcription factor -
SSUD12_RS06420 () 1288304..1289557 + 1254 WP_014637301.1 IS110 family transposase ISSpn10 Transposase
SSUD12_RS06425 () 1289686..1290018 - 333 WP_014638213.1 LytTR family transcriptional regulator DNA-binding domain-containing protein -
SSUD12_RS06430 () 1290358..1290597 + 240 WP_041179273.1 hypothetical protein -
SSUD12_RS11515 () 1290539..1291204 - 666 Protein_1211 lantibiotic (srt) production protein -
SSUD12_RS11520 () 1291330..1292094 - 765 WP_014638216.1 relaxase/mobilization nuclease domain-containing protein -
SSUD12_RS06440 () 1292244..1292861 - 618 WP_014638217.1 SAP domain-containing protein -
SSUD12_RS11170 () 1292874..1293062 - 189 Protein_1214 hypothetical protein -
SSUD12_RS06445 () 1293178..1294185 - 1008 Protein_1215 hypothetical protein ; Integrase Integrase
SSUD12_RS06450 () 1294661..1295947 - 1287 Protein_1216 Tet(L)/Tet(K)/Tet(45) family tetracycline efflux MFS transporter -
SSUD12_RS11730 () 1295948..1296517 - 570 Protein_1217 relaxase/mobilization nuclease domain-containing protein -
SSUD12_RS06455 () 1296504..1296869 - 366 WP_000431640.1 plasmid mobilization relaxosome protein MobC -
SSUD12_RS06460 () 1296872..1297234 - 363 WP_000140674.1 hypothetical protein -
SSUD12_RS06465 () 1297572..1300079 - 2508 WP_001213955.1 AAA family ATPase -
SSUD12_RS06470 () 1300116..1300883 - 768 WP_001235242.1 zeta toxin family protein Toxin Detail
SSUD12_RS06475 () 1300883..1301359 - 477 WP_000578719.1 helix-turn-helix domain-containing protein Antitoxin Detail
SSUD12_RS06480 () 1301429..1301719 - 291 WP_000667951.1 hypothetical protein -
SSUD12_RS06485 () 1301735..1302124 - 390 WP_000048066.1 hypothetical protein -
SSUD12_RS06490 () 1302121..1302348 - 228 WP_000110922.1 hypothetical protein -
SSUD12_RS06495 () 1302376..1303476 - 1101 WP_014638221.1 toprim domain-containing protein -
SSUD12_RS06500 () 1303515..1304153 - 639 WP_014636296.1 hypothetical protein -
SSUD12_RS06505 () 1305554..1306153 - 600 WP_014638223.1 response regulator transcription factor -
SSUD12_RS06510 () 1306131..1307639 - 1509 WP_014638224.1 ATP-binding protein -
SSUD12_RS06515 () 1307643..1308332 - 690 WP_014638225.1 ABC transporter permease -
SSUD12_RS06520 () 1308342..1309061 - 720 WP_014638226.1 ABC transporter permease -
SSUD12_RS06525 () 1309039..1309953 - 915 WP_014638227.1 Ribosome-associated ATPase VF
SSUD12_RS06530 () 1309925..1312000 - 2076 WP_029171442.1 ATP-binding cassette domain-containing protein -
SSUD12_RS11185 () 1312006..1314510 - 2505 WP_014638229.1 DUF4135 domain-containing protein -
SSUD12_RS06540 () 1314594..1314767 - 174 WP_012775117.1 type A2 lantipeptide -
SSUD12_RS11190 () 1315108..1315293 - 186 Protein_1236 hypothetical protein -
SSUD12_RS06550 () 1315357..1315620 - 264 WP_000253176.1 hypothetical protein -
SSUD12_RS06555 () 1315620..1315850 - 231 WP_001206986.1 hypothetical protein -
SSUD12_RS06560 () 1315896..1316750 - 855 WP_000743700.1 ParB/RepB/Spo0J family partition protein -
SSUD12_RS06565 () 1316759..1317724 - 966 WP_001820668.1 plasmid recombination protein -
SSUD12_RS06570 () 1318249..1319274 - 1026 WP_014638230.1 AAA family ATPase -
SSUD12_RS11525 () 1319429..1319903 - 475 Protein_1242 sigma-70 family RNA polymerase sigma factor -
SSUD12_RS06580 () 1319987..1320412 - 426 WP_000323895.1 sigma-70 family RNA polymerase sigma factor -
SSUD12_RS06585 () 1320507..1321019 - 513 WP_000241709.1 sigma-70 family RNA polymerase sigma factor -
SSUD12_RS11205 () 1321507..1321680 - 174 WP_002779755.1 cysteine-rich KTR domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance