MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 122694 bp
Accession: NC_017618 Location: 531361..654054 Organism: Streptococcus suis JS14 Replicon: chromosome
Accession: NC_017618 Location: 531361..654054 Organism: Streptococcus suis JS14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSUJS14_RS02710 () | 528980..529990 | + | 1011 | WP_011922091.1 | 6-phosphofructokinase | - |
| SSUJS14_RS02715 () | 530057..531562 | + | 1506 | WP_002935530.1 | pyruvate kinase | - |
| SSUJS14_RS02720 () | 531723..534977 | + | 3255 | WP_012775646.1 | IgM protease | VF |
| SSUJS14_RS02725 () | 535302..536411 | - | 1110 | WP_012775645.1 | FAD-binding oxidoreductase | - |
| SSUJS14_RS02730 () | 536496..537113 | + | 618 | WP_011922094.1 | esterase | - |
| SSUJS14_RS02735 () | 537156..537698 | + | 543 | WP_011922095.1 | signal peptidase I | - |
| SSUJS14_RS02740 () | 537888..539699 | + | 1812 | WP_012775016.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
| SSUJS14_RS02745 () | 539851..540492 | + | 642 | WP_002940990.1 | amino acid ABC transporter permease | - |
| SSUJS14_RS02750 () | 540502..541134 | + | 633 | WP_011922097.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| SSUJS14_RS02755 () | 541161..541991 | + | 831 | WP_024379094.1 | amino acid ABC transporter substrate-binding protein | - |
| SSUJS14_RS02760 () | 543830..544468 | - | 639 | WP_011922101.1 | MBL fold metallo-hydrolase | - |
| SSUJS14_RS02765 () | 544531..547044 | + | 2514 | WP_014636249.1 | bifunctional DnaQ family exonuclease/ATP-dependent helicase | - |
| SSUJS14_RS02770 () | 547204..548280 | + | 1077 | WP_011922103.1 | glutamate 5-kinase | - |
| SSUJS14_RS02775 () | 548345..549583 | + | 1239 | WP_014636250.1 | glutamate-5-semialdehyde dehydrogenase | - |
| SSUJS14_RS02780 () | 549593..550378 | + | 786 | WP_014636251.1 | pyrroline-5-carboxylate reductase | - |
| SSUJS14_RS02785 () | 550401..550805 | - | 405 | WP_011922106.1 | TetR/AcrR family transcriptional regulator | - |
| SSUJS14_RS02790 () | 550932..551783 | + | 852 | WP_002938910.1 | DegV family protein | - |
| SSUJS14_RS02795 () | 551882..553141 | - | 1260 | WP_014636252.1 | PLP-dependent aminotransferase family protein | - |
| SSUJS14_RS02800 () | 553264..553998 | + | 735 | WP_012775019.1 | peroxide stress protein YaaA | - |
| SSUJS14_RS02805 () | 554103..555542 | + | 1440 | WP_014636253.1 | Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagT | VF |
| SSUJS14_RS02810 () | 555566..556255 | + | 690 | WP_014636254.1 | putative capsular polysaccharide biosynthesis protein YwqC | VF |
| SSUJS14_RS02815 () | 556265..556942 | + | 678 | WP_014636255.1 | Tyrosine-protein kinase CpsD | VF |
| SSUJS14_RS02820 () | 556981..557712 | + | 732 | WP_014636256.1 | Tyrosine-protein phosphatase CpsB | VF |
| SSUJS14_RS02825 () | 557737..559116 | + | 1380 | WP_014636257.1 | putative sugar transferase EpsL | VF |
| SSUJS14_RS02830 () | 559123..559572 | + | 450 | WP_014636258.1 | hypothetical protein | VF |
| SSUJS14_RS02835 () | 559572..560066 | + | 495 | WP_014636259.1 | hypothetical protein | VF |
| SSUJS14_RS02840 () | 560785..561951 | + | 1167 | WP_014636260.1 | O-antigen ligase family protein | - |
| SSUJS14_RS02845 () | 561944..562912 | + | 969 | WP_014636261.1 | putative glycosyltransferase EpsJ | VF |
| SSUJS14_RS02850 () | 562921..563892 | + | 972 | WP_014636262.1 | putative glycosyltransferase EpsJ | VF |
| SSUJS14_RS02855 () | 563914..564918 | + | 1005 | WP_141577581.1 | putative glycosyltransferase EpsJ | VF |
| SSUJS14_RS02860 () | 564958..565269 | + | 312 | WP_009909574.1 | hypothetical protein | - |
| SSUJS14_RS11195 () | 565235..565603 | - | 369 | WP_162038632.1 | hypothetical protein | - |
| SSUJS14_RS10680 () | 565578..565976 | + | 399 | WP_014636264.1 | hypothetical protein | - |
| SSUJS14_RS10685 () | 566144..566401 | + | 258 | WP_079394833.1 | N-acylneuraminate cytidylyltransferase | VF |
| SSUJS14_RS02870 () | 566767..567738 | + | 972 | WP_011922741.1 | hypothetical protein | VF |
| SSUJS14_RS02875 () | 567747..569153 | + | 1407 | WP_002936324.1 | hypothetical protein | VF |
| SSUJS14_RS02880 () | 569676..570692 | + | 1017 | WP_002936321.1 | N,N'-diacetyllegionaminic acid synthase | VF |
| SSUJS14_RS02885 () | 570704..571837 | + | 1134 | WP_014636265.1 | Polysialic acid biosynthesis protein P7 | VF |
| SSUJS14_RS02890 () | 571827..572477 | + | 651 | WP_011922122.1 | Putative acetyltransferase EpsM | VF |
| SSUJS14_RS02895 () | 572486..573718 | + | 1233 | WP_012775023.1 | N-acylneuraminate cytidylyltransferase | VF |
| SSUJS14_RS10690 () | 573915..574788 | + | 874 | Protein_510 | IS5 family transposase ISSth7 | Transposase |
| SSUJS14_RS02910 () | 575024..575209 | + | 186 | WP_014635926.1 | hypothetical protein | - |
| SSUJS14_RS02915 () | 575190..575477 | + | 288 | WP_011922127.1 | IS66 family transposase ISDeal1 | Transposase |
| SSUJS14_RS02920 () | 575594..575800 | + | 207 | WP_002936301.1 | IS66 family transposase ISBthe6 | Transposase |
| SSUJS14_RS02925 () | 575754..577085 | + | 1332 | Protein_514 | IS66 family transposase ISDeal1 | Transposase |
| SSUJS14_RS11055 () | 577289..578128 | + | 840 | Protein_515 | IS30 family transposase | - |
| SSUJS14_RS11060 () | 578463..579070 | - | 608 | Protein_516 | tyrosine-type recombinase/integrase | - |
| SSUJS14_RS02945 () | 579471..579725 | + | 255 | WP_014636268.1 | hypothetical protein | - |
| SSUJS14_RS02950 () | 579744..580124 | + | 381 | WP_014636269.1 | hypothetical protein | - |
| SSUJS14_RS10715 () | 580228..580467 | + | 240 | WP_074390219.1 | hypothetical protein | - |
| SSUJS14_RS02955 () | 580462..582819 | - | 2358 | WP_012775024.1 | hypothetical protein | - |
| SSUJS14_RS02960 () | 583036..584316 | + | 1281 | WP_012775025.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| SSUJS14_RS02965 () | 584325..584816 | + | 492 | WP_011922141.1 | shikimate kinase | - |
| SSUJS14_RS02970 () | 584807..585634 | + | 828 | WP_009909609.1 | prephenate dehydratase | - |
| SSUJS14_RS02975 () | 585646..586971 | + | 1326 | WP_011922144.1 | LCP family protein | - |
| SSUJS14_RS02980 () | 587037..588398 | + | 1362 | WP_014636270.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| SSUJS14_RS11210 () | 588609..588776 | + | 168 | WP_014636271.1 | hypothetical protein | - |
| SSUJS14_RS02990 () | 588779..589597 | + | 819 | WP_014636272.1 | replication initiator protein A | - |
| SSUJS14_RS02995 () | 589746..591101 | + | 1356 | WP_014636274.1 | DNA (cytosine-5-)-methyltransferase | - |
| SSUJS14_RS03000 () | 591085..591513 | + | 429 | WP_014636275.1 | hypothetical protein | - |
| SSUJS14_RS03005 () | 591524..591907 | + | 384 | WP_014636276.1 | hypothetical protein | - |
| SSUJS14_RS03010 () | 591916..592149 | + | 234 | WP_014636277.1 | hypothetical protein | - |
| SSUJS14_RS03015 () | 592152..592736 | + | 585 | WP_014636278.1 | CPBP family intramembrane metalloprotease | - |
| SSUJS14_RS03020 () | 592813..593301 | + | 489 | WP_041179161.1 | hypothetical protein | - |
| SSUJS14_RS03025 () | 593301..595118 | + | 1818 | WP_014636280.1 | type IV secretory system conjugative DNA transfer family protein | - |
| SSUJS14_RS03030 () | 595136..595378 | + | 243 | WP_001072182.1 | hypothetical protein | - |
| SSUJS14_RS03035 () | 595397..596251 | + | 855 | WP_014636281.1 | conjugal transfer protein TrbL | - |
| SSUJS14_RS03040 () | 596313..596666 | + | 354 | WP_014636282.1 | PrgI family protein | - |
| SSUJS14_RS03045 () | 596623..598974 | + | 2352 | WP_014636283.1 | ATPase AAA | - |
| SSUJS14_RS03050 () | 598976..601867 | + | 2892 | WP_014636284.1 | CHAP domain-containing protein | - |
| SSUJS14_RS03055 () | 601953..602417 | - | 465 | WP_014636285.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| SSUJS14_RS03060 () | 602461..603583 | + | 1123 | Protein_541 | IS110 family transposase ISVisp2 | Transposase |
| SSUJS14_RS03065 () | 604076..604522 | - | 447 | Protein_542 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| SSUJS14_RS03070 () | 604519..605109 | - | 591 | WP_000037237.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| SSUJS14_RS03075 () | 605279..610174 | + | 4896 | WP_014636287.1 | Agglutinin receptor | VF |
| SSUJS14_RS03080 () | 610175..610366 | + | 192 | WP_014636288.1 | calcium-binding protein | - |
| SSUJS14_RS03085 () | 610350..610901 | + | 552 | WP_014636289.1 | hypothetical protein | - |
| SSUJS14_RS03090 () | 610950..616898 | + | 5949 | WP_014636290.1 | DEAD/DEAH box helicase family protein | - |
| SSUJS14_RS03095 () | 616879..617254 | + | 376 | Protein_548 | TnpV protein | - |
| SSUJS14_RS03100 () | 617621..619540 | + | 1920 | WP_014636291.1 | Tetracycline resistance protein TetO | VF |
| SSUJS14_RS03105 () | 619591..620811 | + | 1221 | WP_009247026.1 | hypothetical protein | ARG |
| SSUJS14_RS03110 () | 621410..621919 | + | 510 | WP_041179152.1 | hypothetical protein | VF |
| SSUJS14_RS03115 () | 622014..622439 | + | 426 | WP_000323896.1 | sigma-70 family RNA polymerase sigma factor | - |
| SSUJS14_RS03120 () | 622523..622996 | + | 474 | WP_000323521.1 | sigma-70 family RNA polymerase sigma factor | - |
| SSUJS14_RS03125 () | 623150..624181 | + | 1032 | WP_001170965.1 | AAA family ATPase | - |
| SSUJS14_RS03130 () | 624700..625673 | + | 974 | Protein_555 | plasmid recombination protein | - |
| SSUJS14_RS03135 () | 625681..626535 | + | 855 | WP_000743701.1 | ParB/RepB/Spo0J family partition protein | - |
| SSUJS14_RS03140 () | 626612..626842 | + | 231 | WP_000659121.1 | hypothetical protein | - |
| SSUJS14_RS03145 () | 626913..627104 | + | 192 | WP_000503424.1 | hypothetical protein | - |
| SSUJS14_RS03150 () | 627158..628930 | + | 1773 | WP_014636293.1 | IS607 family transposase ISTsi1 | Transposase |
| SSUJS14_RS03155 () | 628897..629856 | + | 960 | Protein_560 | hypothetical protein | - |
| SSUJS14_RS03160 () | 629927..630226 | + | 300 | WP_014636295.1 | hypothetical protein | - |
| SSUJS14_RS03165 () | 630240..630530 | + | 291 | WP_000893083.1 | hypothetical protein | - |
| SSUJS14_RS03170 () | 630625..631263 | + | 639 | WP_014636296.1 | hypothetical protein | - |
| SSUJS14_RS03175 () | 631303..632403 | + | 1101 | WP_014636297.1 | toprim domain-containing protein | - |
| SSUJS14_RS03180 () | 632431..632658 | + | 228 | WP_000110922.1 | hypothetical protein | - |
| SSUJS14_RS03185 () | 632655..633044 | + | 390 | WP_014636298.1 | hypothetical protein | - |
| SSUJS14_RS03190 () | 633094..633384 | + | 291 | WP_000667951.1 | hypothetical protein | - |
| SSUJS14_RS03195 () | 633454..633930 | + | 477 | WP_000578719.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SSUJS14_RS03200 () | 633930..634697 | + | 768 | WP_001235242.1 | zeta toxin family protein | Toxin Detail |
| SSUJS14_RS03205 () | 634734..637241 | + | 2508 | WP_001213955.1 | AAA family ATPase | - |
| SSUJS14_RS03210 () | 637579..637941 | + | 363 | WP_000140674.1 | hypothetical protein | - |
| SSUJS14_RS03215 () | 637944..638309 | + | 366 | WP_000431640.1 | plasmid mobilization relaxosome protein MobC | - |
| SSUJS14_RS03220 () | 638296..640179 | + | 1884 | WP_014636299.1 | relaxase/mobilization nuclease domain-containing protein | - |
| SSUJS14_RS03225 () | 640276..640491 | + | 216 | WP_014636300.1 | hypothetical protein | - |
| SSUJS14_RS03230 () | 640573..641649 | + | 1077 | WP_014636301.1 | S8 family serine peptidase | - |
| SSUJS14_RS03235 () | 641690..642388 | + | 699 | WP_000276750.1 | Sensory transduction protein regX3 | VF |
| SSUJS14_RS03240 () | 642366..643709 | + | 1344 | WP_000977993.1 | HAMP domain-containing histidine kinase | - |
| SSUJS14_RS03245 () | 643899..644600 | + | 702 | WP_000452012.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| SSUJS14_RS03250 () | 644593..645330 | + | 738 | WP_000181737.1 | lantibiotic ABC transporter permease | - |
| SSUJS14_RS03255 () | 645308..645994 | + | 687 | WP_001033677.1 | hypothetical protein | - |
| SSUJS14_RS10730 () | 646342..646509 | + | 168 | WP_001058290.1 | gallidermin/nisin family lantibiotic | - |
| SSUJS14_RS03260 () | 646750..649725 | + | 2976 | WP_014636302.1 | lantibiotic dehydratase | - |
| SSUJS14_RS03265 () | 649706..651514 | + | 1809 | WP_000536729.1 | ABC transporter ATP-binding protein/permease | - |
| SSUJS14_RS03270 () | 651507..652784 | + | 1278 | WP_000344171.1 | lanthionine synthetase C family protein | - |
| SSUJS14_RS03275 () | 652786..653502 | + | 717 | WP_001226539.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| SSUJS14_RS03280 () | 653770..654174 | + | 405 | WP_000878635.1 | sigma-70 family RNA polymerase sigma factor | - |
| SSUJS14_RS03285 () | 654679..656484 | + | 1806 | WP_014636303.1 | recombinase family protein | - |
| SSUJS14_RS03290 () | 656852..657022 | + | 171 | WP_002941306.1 | hypothetical protein | - |
| SSUJS14_RS03295 () | 657409..658626 | + | 1218 | WP_014636304.1 | macrolide efflux MFS transporter Mef(A) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|