MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 49961 bp
Accession: NC_017151 Location: 1..49961 Organism: Acetobacter pasteurianus IFO 3283-01-42C Replicon: plasmid pAPA42C_030
Accession: NC_017151 Location: 1..49961 Organism: Acetobacter pasteurianus IFO 3283-01-42C Replicon: plasmid pAPA42C_030
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APA42C_RS15060 () | 510..1070 | + | 561 | WP_041633465.1 | recombinase family protein | - |
| APA42C_RS15065 () | 1194..1433 | + | 240 | WP_012813361.1 | ribbon-helix-helix domain-containing protein | - |
| APA42C_RS15070 () | 1433..1855 | + | 423 | WP_041633467.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| APA42C_RS15075 () | 1949..2206 | - | 258 | WP_012813363.1 | conjugal transfer protein TraD | - |
| APA42C_RS15090 () | 3462..3941 | + | 480 | WP_012813366.1 | hypothetical protein | - |
| APA42C_RS15095 () | 4027..6345 | - | 2319 | WP_012813367.1 | Hint domain-containing protein | - |
| APA42C_RS15100 () | 6764..7560 | - | 797 | Protein_8 | IS5 family transposase | - |
| APA42C_RS15985 () | 7752..7907 | + | 156 | WP_012813370.1 | DNA resolvase | - |
| APA42C_RS15115 () | 9078..9491 | + | 414 | WP_167316222.1 | recombinase family protein | - |
| APA42C_RS15120 () | 9725..10318 | - | 594 | WP_003630649.1 | recombinase family protein | - |
| APA42C_RS15125 () | 10437..11936 | + | 1500 | WP_012812886.1 | DDE-type integrase/transposase/recombinase | - |
| APA42C_RS15130 () | 11936..12760 | + | 825 | WP_012813374.1 | AAA family ATPase | - |
| APA42C_RS15135 () | 12838..13455 | + | 618 | WP_041633471.1 | recombinase family protein | - |
| APA42C_RS15140 () | 13498..14133 | + | 636 | WP_012813376.1 | AAA family ATPase | - |
| APA42C_RS15145 () | 14160..14411 | + | 252 | WP_012813377.1 | hypothetical protein | - |
| APA42C_RS15150 () | 14447..15547 | - | 1101 | WP_012813378.1 | replication initiator protein A | - |
| APA42C_RS15990 () | 16437..16610 | + | 174 | WP_082179791.1 | DUF4160 domain-containing protein | - |
| APA42C_RS15155 () | 16600..17007 | + | 408 | WP_012813379.1 | DUF2442 domain-containing protein | - |
| APA42C_RS15160 () | 17110..17337 | + | 228 | WP_012813380.1 | transcriptional regulator | - |
| APA42C_RS15165 () | 17334..17729 | + | 396 | WP_012813381.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| APA42C_RS15170 () | 17857..18102 | + | 246 | WP_006560453.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| APA42C_RS15175 () | 18099..18485 | + | 387 | WP_012813382.1 | type II toxin-antitoxin system VapC family toxin | - |
| APA42C_RS15995 () | 18511..18687 | + | 177 | WP_012813383.1 | hypothetical protein | - |
| APA42C_RS15180 () | 18772..19026 | + | 255 | WP_012813384.1 | hypothetical protein | - |
| APA42C_RS16320 () | 19122..19292 | - | 171 | WP_162010041.1 | hypothetical protein | - |
| APA42C_RS15185 () | 19295..19627 | - | 333 | WP_012813386.1 | hypothetical protein | - |
| APA42C_RS15190 () | 19731..19970 | - | 240 | WP_012813387.1 | conjugal transfer protein TraD | - |
| APA42C_RS15195 () | 20035..20394 | - | 360 | WP_012813388.1 | conjugal transfer protein TraD | - |
| APA42C_RS15200 () | 20491..23577 | + | 3087 | WP_012813389.1 | Ti-type conjugative transfer relaxase TraA | - |
| APA42C_RS15205 () | 23643..23894 | + | 252 | WP_041633476.1 | plasmid stabilization protein | Antitoxin Detail |
| APA42C_RS15210 () | 23891..24313 | + | 423 | WP_012813391.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| APA42C_RS15215 () | 24313..24540 | + | 228 | WP_012813392.1 | hypothetical protein | - |
| APA42C_RS15220 () | 24683..26068 | - | 1386 | WP_012813107.1 | IS1380 family transposase | - |
| APA42C_RS15225 () | 26126..26365 | - | 240 | WP_012813393.1 | recombinase family protein | - |
| APA42C_RS15230 () | 26520..26993 | - | 474 | WP_012813394.1 | ParA family protein | - |
| APA42C_RS16000 () | 27348..27875 | - | 528 | WP_082179792.1 | helix-turn-helix domain-containing protein | - |
| APA42C_RS15235 () | 28082..28381 | - | 300 | WP_012813395.1 | transcriptional regulator | - |
| APA42C_RS15240 () | 28383..28721 | - | 339 | WP_012813396.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| APA42C_RS15245 () | 28904..29188 | + | 285 | WP_041633485.1 | hypothetical protein | - |
| APA42C_RS15250 () | 29249..30058 | - | 810 | WP_012813398.1 | alpha/beta hydrolase | - |
| APA42C_RS15265 () | 31330..32517 | - | 1188 | WP_012813399.1 | GIY-YIG nuclease family protein | - |
| APA42C_RS15270 () | 32510..34594 | - | 2085 | WP_012813400.1 | DEAD/DEAH box helicase | - |
| APA42C_RS15275 () | 34598..37306 | - | 2709 | WP_012813401.1 | N-6 DNA methylase | - |
| APA42C_RS15280 () | 37346..38440 | - | 1095 | WP_012813402.1 | Fic family protein | - |
| APA42C_RS15285 () | 38767..39237 | - | 471 | WP_012813403.1 | hypothetical protein | - |
| APA42C_RS15290 () | 39775..40191 | + | 417 | WP_012813404.1 | hypothetical protein | - |
| APA42C_RS15295 () | 40261..40644 | - | 384 | WP_012813405.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| APA42C_RS15300 () | 40637..40972 | - | 336 | WP_012813406.1 | hypothetical protein | - |
| APA42C_RS15305 () | 41074..41559 | - | 486 | WP_012813407.1 | recombinase family protein | - |
| APA42C_RS15310 () | 41753..43138 | - | 1386 | WP_012813229.1 | IS1380-like element IS1380A family transposase | - |
| APA42C_RS15315 () | 43256..43723 | + | 468 | WP_012813408.1 | hypothetical protein | - |
| APA42C_RS15320 () | 43809..45986 | - | 2178 | WP_012813409.1 | Hint domain-containing protein | - |
| APA42C_RS15330 () | 46313..47400 | + | 1088 | WP_088365001.1 | IS3 family transposase | - |
| APA42C_RS15335 () | 47575..47913 | + | 339 | WP_012813396.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| APA42C_RS15340 () | 47915..48214 | + | 300 | WP_012813395.1 | transcriptional regulator | - |
| APA42C_RS16005 () | 48421..48948 | + | 528 | WP_082179792.1 | helix-turn-helix domain-containing protein | - |
| APA42C_RS15345 () | 49303..49938 | + | 636 | WP_012813410.1 | ParA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|