MGE detailed information
MGE type: Prophage MGE length: 10778 bp
Accession: NC_013716 Location: 4614518..4625295 Organism: Citrobacter rodentium ICC168 Replicon: chromosome
Accession: NC_013716 Location: 4614518..4625295 Organism: Citrobacter rodentium ICC168 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ROD_RS21520 () | 4609654..4610919 | + | 1266 | WP_012908295.1 | 4-aminobutyrate--2-oxoglutarate transaminase | - |
| ROD_RS21525 () | 4611060..4612262 | + | 1203 | WP_012908296.1 | amino acid permease | - |
| ROD_RS21530 () | 4612515..4613618 | + | 1104 | WP_012908297.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| ROD_RS21535 () | 4613709..4614092 | - | 384 | WP_012908298.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| ROD_RS21540 () | 4614518..4615627 | + | 1110 | WP_012908300.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| ROD_RS21545 () | 4615689..4616615 | + | 927 | WP_012908301.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| ROD_RS21550 () | 4616612..4617889 | + | 1278 | WP_012908302.1 | branched chain amino acid ABC transporter permease LivM | - |
| ROD_RS21555 () | 4617886..4618653 | + | 768 | WP_012908303.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| ROD_RS21560 () | 4618655..4619368 | + | 714 | WP_012908304.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| ROD_RS21565 () | 4619509..4619730 | + | 222 | WP_012908305.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| ROD_RS21570 () | 4619727..4620095 | + | 369 | WP_012908306.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| ROD_RS21575 () | 4620334..4621650 | + | 1317 | WP_012908307.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| ROD_RS21580 () | 4621751..4622638 | + | 888 | WP_012908308.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| ROD_RS21585 () | 4622635..4623480 | + | 846 | WP_012908309.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| ROD_RS21590 () | 4623482..4624552 | + | 1071 | WP_012908310.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| ROD_RS21595 () | 4624549..4625295 | + | 747 | WP_012908311.1 | glycerophosphodiester phosphodiesterase | - |
| ROD_RS21600 () | 4625279..4625653 | - | 375 | WP_024133037.1 | DUF2756 family protein | - |
| ROD_RS21605 () | 4625776..4627521 | + | 1746 | WP_012908313.1 | gamma-glutamyltransferase | - |
| ROD_RS21610 () | 4627621..4627926 | - | 306 | WP_012908314.1 | hypothetical protein | - |
| ROD_RS25670 () | 4627928..4629136 | - | 1209 | WP_012908315.1 | type VI secretion system tube protein Hcp | - |
| ROD_RS21620 () | 4629395..4629883 | - | 489 | WP_012908316.1 | N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|