MGE detailed information
MGE type: IS/Tn MGE length: 1221 bp
Accession: NC_013716 Location: 4077371..4078591 Organism: Citrobacter rodentium ICC168 Replicon: chromosome
Accession: NC_013716 Location: 4077371..4078591 Organism: Citrobacter rodentium ICC168 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ROD_RS19100 () | 4072986..4073888 | + | 903 | WP_012907849.1 | formate dehydrogenase subunit beta | - |
| ROD_RS19105 () | 4073885..4074520 | + | 636 | WP_012907850.1 | formate dehydrogenase cytochrome b556 subunit | - |
| ROD_RS19110 () | 4074781..4075710 | + | 930 | WP_012907851.1 | formate dehydrogenase accessory protein FdhE | - |
| ROD_RS19115 () | 4075748..4076122 | - | 375 | WP_012907852.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| ROD_RS19120 () | 4076122..4076364 | - | 243 | WP_162467731.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| ROD_RS19125 () | 4076630..4077337 | + | 708 | WP_012904922.1 | T3SS effector protein NleD | - |
| ROD_RS19130 () | 4077371..4078591 | + | 1221 | WP_012907853.1 | ISL3 family transposase ISEc53 | Transposase |
| ROD_RS19135 () | 4078647..4079588 | + | 942 | WP_012907854.1 | alpha/beta hydrolase | - |
| ROD_RS19140 () | 4079598..4080539 | - | 942 | WP_024132973.1 | fatty acid biosynthesis protein FabY | - |
| ROD_RS19145 () | 4080584..4081021 | - | 438 | WP_012907856.1 | D-tyrosyl-tRNA(Tyr) deacylase | - |
| ROD_RS19150 () | 4081018..4081890 | - | 873 | WP_012907857.1 | virulence factor BrkB family protein | - |
| ROD_RS19155 () | 4081884..4082483 | - | 600 | WP_012907858.1 | glucose-1-phosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|