MGE detailed information
MGE type: Genomic_island MGE length: 48966 bp
Accession: NC_013654 Location: 277261..326226 Organism: Escherichia coli SE15 Replicon: chromosome
Accession: NC_013654 Location: 277261..326226 Organism: Escherichia coli SE15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECSF_RS01280 () | 272555..272956 | + | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
| ECSF_RS01285 () | 272995..274050 | - | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| ECSF_RS01290 () | 274339..275442 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| ECSF_RS01295 () | 275454..276707 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| ECSF_RS26360 () | 276912..277115 | - | 204 | Protein_249 | integrase | - |
| ECSF_RS01305 () | 277261..277731 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| ECSF_RS26305 () | 277709..277894 | - | 186 | WP_101918754.1 | ash family protein | - |
| ECSF_RS01310 () | 278074..279321 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| ECSF_RS01315 () | 279311..280948 | - | 1638 | WP_000229741.1 | type I restriction-modification system subunit M | - |
| ECSF_RS01320 () | 280942..284040 | - | 3099 | WP_000673070.1 | type I restriction endonuclease subunit R | - |
| ECSF_RS01325 () | 284324..285106 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| ECSF_RS01330 () | 285093..286013 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| ECSF_RS24115 () | 286178..287497 | - | 1320 | Protein_257 | Prophage integrase IntA ; Integrase | Integrase |
| ECSF_RS26180 () | 287724..287882 | - | 159 | Protein_258 | integrase | - |
| ECSF_RS01345 () | 287931..288116 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| ECSF_RS01350 () | 288331..288945 | + | 615 | WP_001019923.1 | YagU family protein | - |
| ECSF_RS24125 () | 289019..289182 | + | 164 | Protein_261 | tail fiber assembly protein | - |
| ECSF_RS01355 () | 289194..289523 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| ECSF_RS01360 () | 289830..290540 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| ECSF_RS01365 () | 290509..292152 | - | 1644 | WP_001265649.1 | Fimbria adhesin EcpD | VF |
| ECSF_RS01370 () | 292142..294667 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| ECSF_RS01375 () | 294693..295361 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| ECSF_RS01380 () | 295418..296005 | - | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| ECSF_RS01385 () | 296080..296622 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| ECSF_RS24140 () | 297446..297636 | + | 191 | Protein_269 | hypothetical protein | - |
| ECSF_RS01390 () | 297706..297846 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| ECSF_RS01395 () | 297846..298109 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| ECSF_RS01400 () | 298474..298575 | - | 102 | WP_000662258.1 | hypothetical protein | - |
| ECSF_RS01405 () | 299048..300190 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| ECSF_RS01410 () | 300363..301283 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| ECSF_RS01415 () | 301440..302366 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| ECSF_RS01420 () | 302566..303459 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| ECSF_RS01425 () | 303490..304479 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| ECSF_RS01430 () | 304506..305357 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| ECSF_RS01435 () | 305923..310170 | + | 4248 | WP_000092553.1 | Invasin | VF |
| ECSF_RS01440 () | 310295..311152 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| ECSF_RS01445 () | 311400..312269 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| ECSF_RS01450 () | 312429..313022 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| ECSF_RS01455 () | 313034..313270 | - | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| ECSF_RS01460 () | 313379..314704 | - | 1326 | WP_001046304.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| ECSF_RS01465 () | 314931..315785 | + | 855 | WP_001295801.1 | DNA-binding transcriptional regulator RclR | - |
| ECSF_RS01470 () | 316311..317030 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| ECSF_RS01475 () | 317041..318468 | + | 1428 | WP_001295802.1 | iron-sulfur cluster-binding protein | - |
| ECSF_RS01480 () | 318461..319156 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| ECSF_RS01490 () | 319399..320067 | - | 669 | WP_001005267.1 | membrane protein | - |
| ECSF_RS25710 () | 320251..321444 | - | 1194 | WP_072017408.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| ECSF_RS25715 () | 321466..322542 | - | 1077 | Protein_291 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| ECSF_RS01500 () | 322584..323345 | - | 762 | WP_001524129.1 | protein HyxA | - |
| ECSF_RS01505 () | 323499..324293 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| ECSF_RS01510 () | 324623..325186 | - | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| ECSF_RS01520 () | 326268..327938 | - | 1671 | WP_001159126.1 | choline dehydrogenase | - |
| ECSF_RS01525 () | 327952..329424 | - | 1473 | WP_001545821.1 | betaine-aldehyde dehydrogenase | - |
| ECSF_RS01530 () | 329438..330025 | - | 588 | WP_001545822.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|