MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 6884 bp
Accession: NC_012917 Location: 578036..584919 Organism: Pectobacterium carotovorum subsp. carotovorum PC1 Replicon: chromosome
Accession: NC_012917 Location: 578036..584919 Organism: Pectobacterium carotovorum subsp. carotovorum PC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PC1_RS02425 () | 575169..575996 | + | 828 | WP_012773199.1 | alpha/beta hydrolase | - |
| PC1_RS02430 () | 576167..576379 | - | 213 | WP_080516287.1 | CcdB family protein | - |
| PC1_RS02435 () | 576506..576769 | - | 264 | WP_012773200.1 | DUF2798 domain-containing protein | - |
| PC1_RS02440 () | 576898..577800 | + | 903 | WP_012773201.1 | LysR family transcriptional regulator | - |
| PC1_RS02445 () | 578523..579746 | + | 1224 | WP_012773202.1 | ATP-binding protein | - |
| PC1_RS02450 () | 579758..580282 | + | 525 | WP_012773203.1 | RloB domain-containing protein | - |
| PC1_RS02455 () | 580457..580762 | - | 306 | WP_012773204.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PC1_RS02460 () | 580765..580983 | - | 219 | WP_012773205.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PC1_RS02465 () | 581042..581785 | - | 744 | WP_012773206.1 | hypothetical protein | - |
| PC1_RS22255 () | 581927..582097 | + | 171 | WP_155116466.1 | hypothetical protein | - |
| PC1_RS02475 () | 582689..583030 | - | 342 | WP_012773208.1 | hypothetical protein | - |
| PC1_RS22455 () | 583171..583341 | + | 171 | WP_012773209.1 | hypothetical protein | - |
| PC1_RS02480 () | 583483..584742 | - | 1260 | WP_012773210.1 | Prophage integrase IntS ; Integrase | Integrase |
| PC1_RS02490 () | 585106..585681 | - | 576 | WP_012773211.1 | transcriptional regulator | - |
| PC1_RS02495 () | 585725..587476 | - | 1752 | WP_012773212.1 | protein-disulfide reductase DsbD | - |
| PC1_RS02500 () | 587452..587784 | - | 333 | WP_012773213.1 | divalent cation tolerance protein CutA | - |
| PC1_RS02505 () | 587916..589217 | - | 1302 | WP_012773214.1 | anaerobic C4-dicarboxylate transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|