MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 27455 bp
Accession: NC_011367 Location: 1..27455 Organism: Gluconacetobacter diazotrophicus PAl 5 Replicon: plasmid pGDIA01
Accession: NC_011367 Location: 1..27455 Organism: Gluconacetobacter diazotrophicus PAl 5 Replicon: plasmid pGDIA01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GDIA_RS18880 () | 2..244 | - | 243 | Protein_0 | replication initiation protein | - |
| GDIA_RS18885 () | 984..1613 | + | 630 | Protein_1 | replication initiation protein | - |
| GDIA_RS17900 () | 2092..2745 | - | 654 | WP_012555424.1 | ParA family protein | - |
| GDIA_RS17905 () | 2863..3442 | - | 580 | Protein_3 | site-specific integrase | - |
| GDIA_RS17910 () | 3535..3831 | - | 297 | WP_012555425.1 | WGR domain-containing protein | - |
| GDIA_RS17915 () | 3994..4278 | - | 285 | WP_012555426.1 | hypothetical protein | - |
| GDIA_RS17920 () | 4283..4663 | - | 381 | WP_012555427.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| GDIA_RS17925 () | 4660..4890 | - | 231 | WP_012555428.1 | hypothetical protein | - |
| GDIA_RS17930 () | 5103..5522 | + | 420 | WP_012555429.1 | hypothetical protein | - |
| GDIA_RS18130 () | 5559..6146 | - | 588 | WP_012555430.1 | DUF4879 domain-containing protein | - |
| GDIA_RS17940 () | 6649..6879 | + | 231 | WP_144880451.1 | hypothetical protein | - |
| GDIA_RS17945 () | 7136..7999 | + | 864 | WP_012555431.1 | hypothetical protein | - |
| GDIA_RS18895 () | 8400..9458 | + | 1059 | WP_012555432.1 | hypothetical protein | - |
| GDIA_RS17950 () | 9588..10631 | + | 1044 | WP_012555433.1 | hypothetical protein | - |
| GDIA_RS17955 () | 10685..11521 | - | 837 | WP_012222260.1 | IS5 family transposase ISGdi1 | Transposase |
| GDIA_RS18905 () | 11661..13184 | - | 1524 | WP_081434772.1 | sel1 repeat family protein | - |
| GDIA_RS17965 () | 13228..14538 | - | 1311 | WP_081434776.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| GDIA_RS17970 () | 14697..16826 | - | 2130 | WP_169307529.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| GDIA_RS17975 () | 17231..17893 | - | 663 | WP_012555437.1 | hypothetical protein | - |
| GDIA_RS17980 () | 17893..18315 | - | 423 | WP_012555438.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GDIA_RS17985 () | 18312..18563 | - | 252 | WP_012555439.1 | plasmid stabilization protein | Antitoxin Detail |
| GDIA_RS17990 () | 18630..21686 | - | 3057 | WP_043459676.1 | Mobilization protein A | Relaxase |
| GDIA_RS17995 () | 21848..22177 | + | 330 | WP_049763054.1 | conjugal transfer protein TraD | - |
| GDIA_RS18000 () | 22206..22478 | + | 273 | WP_012555442.1 | conjugal transfer protein TraD | - |
| GDIA_RS18005 () | 22514..23098 | + | 585 | WP_081434773.1 | MucR family transcriptional regulator | - |
| GDIA_RS19340 () | 23215..23649 | - | 435 | WP_144880454.1 | hypothetical protein | - |
| GDIA_RS18015 () | 23734..24156 | - | 423 | WP_012555444.1 | type II toxin-antitoxin system VapC family toxin | - |
| GDIA_RS18020 () | 24153..24410 | - | 258 | WP_043459682.1 | plasmid stabilization protein | - |
| GDIA_RS18025 () | 24494..25249 | - | 756 | WP_012555446.1 | metallophosphoesterase | - |
| GDIA_RS18030 () | 25282..26163 | - | 882 | WP_012555447.1 | DNA-binding protein | - |
| GDIA_RS18035 () | 26331..26585 | - | 255 | WP_012555449.1 | hypothetical protein | - |
| GDIA_RS18040 () | 26681..27196 | - | 516 | WP_043459687.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|