MGE detailed information
MGE type: Genomic_island MGE length: 32150 bp
Accession: NC_011206 Location: 187366..219515 Organism: Acidithiobacillus ferrooxidans ATCC 53993 Replicon: chromosome
Accession: NC_011206 Location: 187366..219515 Organism: Acidithiobacillus ferrooxidans ATCC 53993 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFERR_RS00920 () | 182896..183297 | + | 402 | WP_155115423.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LFERR_RS00925 () | 183288..183533 | + | 246 | WP_012535865.1 | SHOCT domain-containing protein | - |
| LFERR_RS00930 () | 183592..184158 | + | 567 | WP_155115448.1 | class I SAM-dependent methyltransferase | - |
| LFERR_RS15195 () | 184467..184730 | + | 264 | WP_155115449.1 | MarR family transcriptional regulator | - |
| LFERR_RS00940 () | 184835..186019 | + | 1185 | WP_012535868.1 | FAD-dependent oxidoreductase | - |
| LFERR_RS00945 () | 186312..187406 | - | 1095 | WP_049756710.1 | IS4 family transposase | - |
| LFERR_RS15585 () | 187366..187521 | - | 156 | WP_196219039.1 | IS4 family transposase ISCARN35 | Transposase |
| LFERR_RS00950 () | 187640..187849 | - | 210 | WP_012535870.1 | DUF4926 domain-containing protein | - |
| LFERR_RS00955 () | 187846..188259 | - | 414 | WP_012535871.1 | hypothetical protein | - |
| LFERR_RS00960 () | 188597..188971 | - | 375 | WP_012535872.1 | copper-binding protein | - |
| LFERR_RS00970 () | 189317..190834 | - | 1518 | WP_012535873.1 | tetratricopeptide repeat protein | - |
| LFERR_RS14360 () | 191343..191657 | - | 315 | WP_012535798.1 | ISAs1 family transposase IS1629 | Transposase |
| LFERR_RS14365 () | 191779..193098 | - | 1320 | WP_012535799.1 | ISAs1 family transposase IS1629 | Transposase |
| LFERR_RS00985 () | 193249..194439 | - | 1191 | WP_012535874.1 | porin | - |
| LFERR_RS00990 () | 194699..195004 | + | 306 | WP_012535875.1 | FtsX-like permease family protein | - |
| LFERR_RS00995 () | 194997..195698 | + | 702 | WP_012535876.1 | putative ABC transporter ATP-binding protein YknY | VF |
| LFERR_RS01000 () | 195688..196191 | + | 504 | WP_012535877.1 | TlpA family protein disulfide reductase | - |
| LFERR_RS01005 () | 196205..196660 | + | 456 | WP_012535878.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| LFERR_RS01010 () | 196917..197318 | + | 402 | WP_012535879.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LFERR_RS01015 () | 197318..199225 | + | 1908 | WP_012535880.1 | cadmium-translocating P-type ATPase | - |
| LFERR_RS01020 () | 199264..199656 | + | 393 | WP_012535881.1 | DUF302 domain-containing protein | - |
| LFERR_RS01025 () | 199715..199951 | + | 237 | WP_196219043.1 | SHOCT domain-containing protein | - |
| LFERR_RS01030 () | 199962..201239 | + | 1278 | WP_080515395.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| LFERR_RS14730 () | 201226..201552 | + | 327 | WP_012535883.1 | ferredoxin | - |
| LFERR_RS15590 () | 201571..201726 | + | 156 | WP_196219045.1 | hypothetical protein | - |
| LFERR_RS01035 () | 201687..202172 | + | 486 | WP_012535884.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| LFERR_RS01040 () | 202263..203846 | + | 1584 | WP_012535885.1 | IS21 family transposase ISCARN17 | Transposase |
| LFERR_RS01045 () | 203849..204613 | + | 765 | WP_196219044.1 | IS21 family transposase ISCARN17 | Transposase |
| LFERR_RS01050 () | 204704..205024 | + | 321 | WP_012535887.1 | hypothetical protein | - |
| LFERR_RS01055 () | 205275..205529 | - | 255 | WP_012535888.1 | hypothetical protein | - |
| LFERR_RS14375 () | 205567..205944 | - | 378 | WP_155115450.1 | SHOCT domain-containing protein | - |
| LFERR_RS01065 () | 206171..206533 | + | 363 | WP_012535890.1 | IS21 family transposase ISAfe9 | Transposase |
| LFERR_RS01070 () | 206554..208740 | - | 2187 | WP_012535891.1 | Transposon Tn7 transposition protein TnsB ; Integrase | Integrase |
| LFERR_RS01075 () | 208744..209589 | - | 846 | WP_012535892.1 | heteromeric transposase endonuclease subunit TnsA | - |
| LFERR_RS01080 () | 209714..210067 | - | 354 | WP_012535893.1 | DUF91 domain-containing protein | - |
| LFERR_RS01090 () | 210455..211240 | - | 786 | WP_012535895.1 | hypothetical protein | - |
| LFERR_RS01095 () | 211285..213567 | - | 2283 | WP_012535896.1 | DEAD/DEAH box helicase family protein | - |
| LFERR_RS01100 () | 213578..214765 | - | 1188 | WP_012535897.1 | restriction endonuclease subunit S | - |
| LFERR_RS01105 () | 214762..216216 | - | 1455 | WP_012535898.1 | type I restriction-modification system subunit M | - |
| LFERR_RS01110 () | 216318..216692 | - | 375 | WP_012535899.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LFERR_RS14735 () | 216689..216886 | - | 198 | WP_012535900.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LFERR_RS01120 () | 217862..218302 | + | 441 | WP_012535902.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| LFERR_RS01125 () | 218478..219050 | - | 573 | WP_012535903.1 | PIN domain-containing protein | Toxin Detail |
| LFERR_RS01130 () | 219051..219515 | - | 465 | WP_012535904.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LFERR_RS14740 () | 219512..219796 | - | 285 | WP_080515396.1 | TIR domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|