MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33103 bp
Accession: NC_010657 Location: 1..33103 Organism: Shigella boydii CDC 3083-94 Replicon: plasmid pBS512_33
Accession: NC_010657 Location: 1..33103 Organism: Shigella boydii CDC 3083-94 Replicon: plasmid pBS512_33
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SBBS512_RS00020 () | 139..726 | + | 588 | WP_000275457.1 | hypothetical protein | - |
| SBBS512_RS00025 () | 738..2891 | + | 2154 | WP_001235750.1 | type IA DNA topoisomerase | - |
| SBBS512_RS00030 () | 2888..3094 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| SBBS512_RS00035 () | 3112..3576 | + | 465 | WP_001293137.1 | H-NS histone family protein | - |
| SBBS512_RS00040 () | 3680..4336 | + | 657 | WP_000972912.1 | hypothetical protein | - |
| SBBS512_RS00045 () | 4892..5716 | + | 825 | WP_001353741.1 | Tyrosine recombinase XerC | VF |
| SBBS512_RS00050 () | 5821..6480 | + | 660 | WP_000516222.1 | hypothetical protein | VF |
| SBBS512_RS00055 () | 6574..6876 | + | 303 | WP_001096507.1 | hypothetical protein | - |
| SBBS512_RS00060 () | 6912..7163 | + | 252 | WP_000928749.1 | hypothetical protein | - |
| SBBS512_RS00070 () | 7747..8274 | - | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| SBBS512_RS00075 () | 8409..8813 | - | 405 | WP_012421203.1 | hypothetical protein | - |
| SBBS512_RS00080 () | 8826..9692 | - | 867 | WP_001353743.1 | replication initiation protein | - |
| SBBS512_RS00085 () | 10947..11282 | + | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SBBS512_RS00090 () | 11279..11629 | + | 351 | WP_000127482.1 | addiction module antitoxin | - |
| SBBS512_RS32625 () | 12269..12784 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| SBBS512_RS00100 () | 12889..13431 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| SBBS512_RS00105 () | 13428..13679 | + | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| SBBS512_RS00110 () | 13666..13893 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| SBBS512_RS30705 () | 14347..14646 | + | 300 | WP_000650311.1 | hypothetical protein | - |
| SBBS512_RS00125 () | 14656..15072 | + | 417 | WP_012421208.1 | tail-associated lysozyme | - |
| SBBS512_RS00130 () | 15069..15380 | + | 312 | WP_000627400.1 | hypothetical protein | - |
| SBBS512_RS27485 () | 15685..15816 | + | 132 | WP_001353745.1 | toxin-antitoxin system HicB family antitoxin | - |
| SBBS512_RS00135 () | 16177..16680 | + | 504 | WP_000781814.1 | hypothetical protein | - |
| SBBS512_RS00140 () | 16684..17913 | + | 1230 | WP_000539543.1 | hypothetical protein | Relaxase |
| SBBS512_RS00145 () | 17990..18283 | + | 294 | WP_000134733.1 | LuxR family transcriptional regulator | - |
| SBBS512_RS00150 () | 18280..18495 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| SBBS512_RS00155 () | 18852..19472 | + | 621 | WP_000157549.1 | hypothetical protein | VF |
| SBBS512_RS00160 () | 19540..19812 | + | 273 | WP_001353733.1 | hypothetical protein | VF |
| SBBS512_RS00165 () | 19831..22578 | + | 2748 | WP_000105980.1 | Type IV secretion system protein virB4 | VF |
| SBBS512_RS00170 () | 22590..23306 | + | 717 | WP_000832281.1 | type IV secretion system protein | - |
| SBBS512_RS00175 () | 23318..24412 | + | 1095 | WP_001353734.1 | type IV secretion system protein | - |
| SBBS512_RS00190 () | 24927..25613 | + | 687 | WP_001290764.1 | Type IV secretion system protein virB8 | VF |
| SBBS512_RS00195 () | 25610..26518 | + | 909 | WP_001353735.1 | Type IV secretion system protein virB9 | VF |
| SBBS512_RS00200 () | 26511..27620 | + | 1110 | WP_000131268.1 | hypothetical protein | VF |
| SBBS512_RS00205 () | 27622..28650 | + | 1029 | WP_001014668.1 | Type IV secretion system protein VirB11 | VF |
| SBBS512_RS00210 () | 28637..30499 | + | 1863 | WP_000847107.1 | type IV secretory system conjugative DNA transfer family protein | - |
| SBBS512_RS00215 () | 30511..30930 | + | 420 | WP_000737409.1 | hypothetical protein | - |
| SBBS512_RS27500 () | 30914..31219 | + | 306 | WP_000147047.1 | IncN plasmid KikA protein | - |
| SBBS512_RS00220 () | 31274..31513 | + | 240 | WP_001290043.1 | hypothetical protein | - |
| SBBS512_RS00225 () | 31616..31924 | + | 309 | WP_000647576.1 | hypothetical protein | - |
| SBBS512_RS00230 () | 31921..32415 | + | 495 | WP_001215682.1 | thermonuclease family protein | - |
| SBBS512_RS00235 () | 32431..32835 | + | 405 | WP_001218539.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|