NC_0091401..176473

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 176473 bp
Accession: NC_009140        Location: 1..176473         Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254       Replicon: plasmid pSN254


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
SNSL254_RS00005 () 323..862 + 540 WP_001447712.1 hypothetical protein -
SNSL254_RS00010 () 867..1154 + 288 WP_000127321.1 hypothetical protein -
SNSL254_RS00015 () 1139..2239 + 1101 WP_000350011.1 plasmid replication protein -
SNSL254_RS00025 () 3276..3710 - 435 WP_000883925.1 hypothetical protein -
SNSL254_RS00030 () 3728..4843 - 1116 WP_000946102.1 phosphoadenosine phosphosulfate reductase family protein -
SNSL254_RS00035 () 5112..5720 + 609 WP_000849071.1 hypothetical protein -
SNSL254_RS00040 () 5725..6246 + 522 WP_000393785.1 hypothetical protein -
SNSL254_RS00045 () 6249..6770 + 522 WP_000805800.1 hypothetical protein -
SNSL254_RS00050 () 6867..7340 + 474 WP_000057877.1 hypothetical protein -
SNSL254_RS00055 () 7351..7644 + 294 WP_001370730.1 hypothetical protein -
SNSL254_RS00060 () 7649..8503 + 855 WP_000539392.1 hypothetical protein -
SNSL254_RS00065 () 8503..9462 + 960 WP_000829616.1 S49 family peptidase -
SNSL254_RS00070 () 9478..10338 + 861 WP_000139698.1 DsbA family protein -
SNSL254_RS00075 () 10372..10800 + 429 WP_000591074.1 hypothetical protein -
SNSL254_RS00080 () 10857..11216 + 360 WP_000422768.1 hypothetical protein -
SNSL254_RS00085 () 11216..11662 + 447 WP_000919345.1 Fe3+-siderophore ABC transporter permease -
SNSL254_RS00090 () 11659..12177 + 519 WP_000210756.1 nitrite reductase -
SNSL254_RS00095 () 12177..12407 + 231 WP_000972663.1 hypothetical protein -
SNSL254_RS00100 () 12394..13251 + 858 WP_001167032.1 hypothetical protein -
SNSL254_RS00110 () 13482..14009 + 528 WP_001236377.1 thermonuclease family protein -
SNSL254_RS00115 () 14067..14339 + 273 WP_001043047.1 HU family DNA-binding protein -
SNSL254_RS00120 () 14427..14720 + 294 WP_001239997.1 chromosome segregation protein ParM -
SNSL254_RS00125 () 14747..15049 - 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
SNSL254_RS00130 () 15054..15404 - 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
SNSL254_RS00135 () 15567..16115 + 549 WP_001061574.1 transcriptional regulator -
SNSL254_RS26085 () 16456..16650 + 195 WP_000343597.1 hypothetical protein -
SNSL254_RS26090 () 16661..17032 + 372 WP_000516916.1 hypothetical protein -
SNSL254_RS00155 () 17025..17495 + 471 WP_001281821.1 hypothetical protein -
SNSL254_RS00160 () 17510..17845 - 336 WP_000683476.1 hypothetical protein -
SNSL254_RS00165 () 17942..18430 + 489 WP_001273096.1 DUF1643 domain-containing protein -
SNSL254_RS00170 () 18433..18930 + 498 WP_000062185.1 hypothetical protein -
SNSL254_RS00175 () 19145..19849 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
SNSL254_RS00180 () 19914..20093 - 180 Protein_32 helix-turn-helix transcriptional regulator -
SNSL254_RS00185 () 20400..21104 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
SNSL254_RS26870 () 21110..21250 + 141 WP_001044210.1 hypothetical protein -
SNSL254_RS00195 () 21736..22473 + 738 WP_001366550.1 recombinase family protein -
SNSL254_RS00200 () 22470..22694 + 225 WP_000743213.1 hypothetical protein -
SNSL254_RS00205 () 22905..24398 + 1494 WP_001120888.1 IS91-like element ISVsa3 family transposase -
SNSL254_RS00210 () 24429..25313 + 885 WP_001447541.1 DUF3363 domain-containing protein -
SNSL254_RS00215 () 25530..26744 + 1215 WP_000214123.1 chloramphenicol/florfenicol efflux MFS transporter FloR -
SNSL254_RS00220 () 26772..27077 + 306 WP_001255015.1 LysR family transcriptional regulator -
SNSL254_RS26515 () 27189..27377 + 189 Protein_41 IS91 family transposase -
SNSL254_RS00225 () 27344..28543 - 1200 WP_000804063.1 tetracycline efflux MFS transporter Tet(A) -
SNSL254_RS00230 () 28649..29299 + 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
SNSL254_RS00235 () 29331..29573 - 243 WP_000844627.1 transposase -
SNSL254_RS00240 () 29879..30715 - 837 WP_000480968.1 aminoglycoside O-phosphotransferase APH(6)-Id -
SNSL254_RS00245 () 30715..31518 - 804 WP_001082319.1 aminoglycoside O-phosphotransferase APH(3'')-Ib -
SNSL254_RS00250 () 31579..32394 - 816 WP_001043260.1 sulfonamide-resistant dihydropteroate synthase Sul2 -
SNSL254_RS00255 () 32701..33012 + 312 WP_000338945.1 hypothetical protein -
SNSL254_RS00260 () 33186..33971 + 786 WP_001151304.1 ParA family protein -
SNSL254_RS00265 () 33975..35156 + 1182 WP_001207227.1 ParB/RepB/Spo0J family partition protein -
SNSL254_RS00270 () 35205..35477 + 273 WP_000703827.1 helix-turn-helix domain-containing protein -
SNSL254_RS00275 () 35530..36165 - 636 WP_000074431.1 N-6 DNA methylase -
SNSL254_RS26875 () 36257..36400 - 144 WP_000939033.1 hypothetical protein -
SNSL254_RS00280 () 36727..37104 + 378 WP_001125904.1 hypothetical protein -
SNSL254_RS00285 () 37097..37378 + 282 WP_000044823.1 hypothetical protein -
SNSL254_RS00290 () 37353..38027 + 675 WP_000344149.1 hypothetical protein -
SNSL254_RS00295 () 38095..38526 + 432 WP_001326170.1 hypothetical protein -
SNSL254_RS00300 () 38532..38843 + 312 WP_001447539.1 hypothetical protein -
SNSL254_RS00305 () 38852..39352 + 501 WP_000647188.1 hypothetical protein -
SNSL254_RS00310 () 39356..40783 + 1428 WP_000936897.1 DNA cytosine methyltransferase -
SNSL254_RS00315 () 40783..41439 + 657 WP_000268552.1 hypothetical protein -
SNSL254_RS00320 () 41495..42112 + 618 WP_000464630.1 hypothetical protein -
SNSL254_RS00330 () 42324..42623 + 300 WP_001326171.1 hypothetical protein -
SNSL254_RS00335 () 42714..43202 - 489 WP_000467110.1 hypothetical protein -
SNSL254_RS00340 () 43217..45409 - 2193 WP_000366823.1 DNA topoisomerase 3 -
SNSL254_RS00345 () 45409..45642 - 234 WP_001191890.1 hypothetical protein -
SNSL254_RS00350 () 45624..46241 - 618 WP_001249395.1 hypothetical protein -
SNSL254_RS00355 () 46409..49381 + 2973 WP_001326173.1 TraI domain-containing protein -
SNSL254_RS00360 () 49378..51243 + 1866 WP_000178857.1 conjugative transfer system coupling protein TraD -
SNSL254_RS00365 () 51254..51838 + 585 WP_000332868.1 hypothetical protein -
SNSL254_RS00370 () 51795..52424 + 630 WP_000743449.1 DUF4400 domain-containing protein -
SNSL254_RS00375 () 52434..52880 + 447 WP_000122507.1 hypothetical protein -
SNSL254_RS00380 () 52890..53267 + 378 WP_000869297.1 hypothetical protein -
SNSL254_RS00385 () 53267..53929 + 663 WP_001231464.1 hypothetical protein -
SNSL254_RS00390 () 54253..54630 + 378 WP_001326174.1 hypothetical protein -
SNSL254_RS00395 () 54775..55056 + 282 WP_000805625.1 type IV conjugative transfer system protein TraL -
SNSL254_RS00400 () 55053..55679 + 627 WP_001049717.1 hypothetical protein -
SNSL254_RS00405 () 55663..56580 + 918 WP_000794249.1 type-F conjugative transfer system secretin TraK -
SNSL254_RS00410 () 56580..57893 + 1314 WP_024131605.1 conjugal transfer protein TraB -
SNSL254_RS00415 () 57890..58468 + 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
SNSL254_RS00420 () 58472..58864 + 393 WP_000479535.1 hypothetical protein -
SNSL254_RS00425 () 59149..60108 + 960 Protein_82 IS1380-like element ISEc9 family transposase -
SNSL254_RS00430 () 60108..60809 - 702 Protein_83 conjugal transfer protein TraC -
SNSL254_RS00435 () 60806..61513 - 708 WP_001259346.1 DsbC family protein -
SNSL254_RS00440 () 61662..67148 - 5487 WP_000606835.1 DUF4165 domain-containing protein -
SNSL254_RS00445 () 67876..68193 + 318 WP_000118520.1 quaternary ammonium compound efflux SMR transporter SugE -
SNSL254_RS00450 () 68190..68723 - 534 WP_001221666.1 lipocalin family protein -
SNSL254_RS00455 () 68817..69962 - 1146 WP_000976514.1 class C beta-lactamase CMY-2 -
SNSL254_RS00460 () 70286..70594 - 309 Protein_89 IS1380 family transposase -
SNSL254_RS00465 () 70781..72043 + 1263 WP_000608644.1 IS1380-like element ISEc9 family transposase -
SNSL254_RS00470 () 72367..73512 + 1146 WP_000976514.1 class C beta-lactamase CMY-2 -
SNSL254_RS00475 () 73606..74139 + 534 WP_001221666.1 lipocalin family protein -
SNSL254_RS00480 () 74136..74453 - 318 WP_000118520.1 quaternary ammonium compound efflux SMR transporter SugE -
SNSL254_RS00485 () 75181..80667 + 5487 WP_000606835.1 DUF4165 domain-containing protein -
SNSL254_RS00490 () 80816..81523 + 708 WP_001259346.1 DsbC family protein -
SNSL254_RS00495 () 81520..83967 + 2448 WP_000637384.1 type IV secretion system protein TraC -
SNSL254_RS00500 () 83982..84299 + 318 WP_000351984.1 hypothetical protein -
SNSL254_RS00505 () 84296..84826 + 531 WP_001010740.1 S26 family signal peptidase -
SNSL254_RS00510 () 84789..86054 + 1266 WP_001447719.1 conjugal transfer protein TraW -
SNSL254_RS00515 () 86051..86722 + 672 WP_000575345.1 EAL domain-containing protein -
SNSL254_RS00520 () 86719..87726 + 1008 WP_000983282.1 TraU family protein -
SNSL254_RS00525 () 87830..90637 + 2808 WP_001447718.1 conjugal transfer mating pair stabilization protein TraN -
SNSL254_RS00530 () 90676..91536 - 861 WP_000709517.1 hypothetical protein -
SNSL254_RS00535 () 91659..92300 - 642 WP_000796664.1 hypothetical protein -
SNSL254_RS00540 () 92595..92915 + 321 WP_000547566.1 hypothetical protein -
SNSL254_RS00545 () 93219..93404 + 186 WP_001186917.1 hypothetical protein -
SNSL254_RS00550 () 93624..94592 + 969 WP_000085160.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
SNSL254_RS00555 () 94603..95511 + 909 WP_000739139.1 hypothetical protein -
SNSL254_RS00560 () 95572..96102 + 531 WP_000987165.1 single-stranded DNA-binding protein -
SNSL254_RS00565 () 96197..97186 + 990 WP_001282585.1 phage recombination protein Bet -
SNSL254_RS00570 () 97249..98259 + 1011 WP_000706865.1 YqaJ viral recombinase family protein -
SNSL254_RS00575 () 98459..99736 + 1278 WP_000170087.1 DUF3150 domain-containing protein -
SNSL254_RS00580 () 99821..101617 + 1797 WP_000039319.1 VWA domain-containing protein -
SNSL254_RS24605 () 101679..102014 + 336 WP_001447572.1 hypothetical protein -
SNSL254_RS00585 () 102279..102818 + 540 WP_000018872.1 hypothetical protein -
SNSL254_RS00590 () 102909..103409 + 501 WP_000793769.1 hypothetical protein -
SNSL254_RS00595 () 103483..104367 + 885 WP_000477209.1 hypothetical protein -
SNSL254_RS00600 () 104433..104657 + 225 WP_001102700.1 2Fe-2S ferredoxin-like protein -
SNSL254_RS00605 () 104719..105108 + 390 WP_000026577.1 hypothetical protein -
SNSL254_RS26095 () 105098..105550 + 453 WP_001176699.1 hypothetical protein -
SNSL254_RS00620 () 105888..106079 + 192 WP_000651508.1 hypothetical protein -
SNSL254_RS00625 () 106124..106501 + 378 WP_001337696.1 hypothetical protein -
SNSL254_RS00630 () 106693..107037 + 345 WP_000209093.1 hypothetical protein -
SNSL254_RS00635 () 107115..107417 + 303 WP_000410925.1 hypothetical protein -
SNSL254_RS00640 () 107495..109120 + 1626 WP_000201432.1 DNA cytosine methyltransferase -
SNSL254_RS00645 () 109181..109612 + 432 WP_000687894.1 hypothetical protein -
SNSL254_RS00650 () 109686..110240 + 555 WP_001093867.1 hypothetical protein -
SNSL254_RS00655 () 110473..110859 + 387 WP_000042274.1 hypothetical protein -
SNSL254_RS00660 () 110947..113400 + 2454 WP_001187969.1 phosphoadenosine phosphosulfate reductase -
SNSL254_RS00665 () 113602..113805 + 204 WP_000050847.1 hypothetical protein -
SNSL254_RS00670 () 113877..114482 + 606 WP_000071870.1 5'-deoxynucleotidase -
SNSL254_RS00675 () 114475..114744 + 270 WP_000184110.1 hypothetical protein -
SNSL254_RS00680 () 114758..114976 + 219 WP_000260293.1 hypothetical protein -
SNSL254_RS00685 () 115050..115607 + 558 WP_000064432.1 hypothetical protein -
SNSL254_RS00690 () 115682..116533 + 852 WP_000595210.1 hypothetical protein -
SNSL254_RS00695 () 116992..117378 + 387 WP_001077336.1 hypothetical protein -
SNSL254_RS00700 () 117556..119283 + 1728 WP_000122922.1 toprim domain-containing protein -
SNSL254_RS00705 () 119270..119548 + 279 WP_000268337.1 hypothetical protein -
SNSL254_RS00710 () 119621..119842 + 222 WP_000714163.1 hypothetical protein -
SNSL254_RS00715 () 120024..121028 - 1005 WP_000427619.1 IS110-like element IS5075 family transposase -
SNSL254_RS00720 () 121107..124079 - 2973 WP_001138073.1 Tn3 family transposase -
SNSL254_RS00725 () 124082..124639 - 558 WP_001162012.1 recombinase family protein -
SNSL254_RS00730 () 124945..125958 - 1014 WP_000845054.1 class 1 integron integrase IntI1 -
SNSL254_RS00735 () 126104..126895 + 792 WP_024131607.1 ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA25 -
SNSL254_RS00740 () 127062..127961 + 900 WP_000131886.1 aminoglycoside N-acetyltransferase AAC(3)-VIa -
SNSL254_RS00745 () 128168..128488 + 321 WP_000535481.1 co-chaperone GroES -
SNSL254_RS00750 () 128544..130181 + 1638 WP_000719078.1 chaperonin GroEL -
SNSL254_RS00755 () 130370..131899 + 1530 WP_001137772.1 IS91 family transposase -
SNSL254_RS00760 () 132167..133402 + 1236 WP_001137513.1 IS256-like element ISEc58 family transposase -
SNSL254_RS00765 () 133620..133967 + 348 WP_000679427.1 quaternary ammonium compound efflux SMR transporter QacE delta 1 -
SNSL254_RS00770 () 133961..134800 + 840 WP_000259031.1 sulfonamide-resistant dihydropteroate synthase Sul1 -
SNSL254_RS00775 () 134928..135428 + 501 WP_000376623.1 GNAT family N-acetyltransferase -
SNSL254_RS00780 () 135963..136748 - 786 WP_000983249.1 IS21-like element IS1326 family helper ATPase IstB -
SNSL254_RS00785 () 136735..138258 - 1524 WP_001324342.1 IS21-like element IS1326 family transposase -
SNSL254_RS00790 () 138381..139925 + 1545 WP_000287615.1 IS3 family transposase -
SNSL254_RS00795 () 139976..140836 - 861 WP_000344784.1 TniB family NTP-binding protein -
SNSL254_RS00800 () 140839..141273 - 435 Protein_157 Mu transposase C-terminal domain-containing protein -
SNSL254_RS00805 () 141327..142031 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
SNSL254_RS00810 () 142094..142798 - 705 WP_001067858.1 IS6-like element IS26 family transposase -
SNSL254_RS00815 () 143008..143997 - 990 WP_001276635.1 DUF3330 domain-containing protein -
SNSL254_RS00820 () 143994..144230 - 237 WP_001087810.1 broad-spectrum mercury transporter MerE -
SNSL254_RS00825 () 144227..144592 - 366 WP_000995361.1 mercury resistance co-regulator MerD -
SNSL254_RS00830 () 144704..145342 - 639 WP_000761850.1 organomercurial lyase MerB -
SNSL254_RS00835 () 145357..147042 - 1686 WP_000149288.1 mercury(II) reductase -
SNSL254_RS00840 () 147114..147389 - 276 WP_000732290.1 mercury resistance system periplasmic binding protein MerP -
SNSL254_RS00845 () 147405..147755 - 351 WP_001294666.1 mercuric transport protein MerT -
SNSL254_RS00850 () 147827..148261 + 435 WP_000414383.1 mercury resistance transcriptional regulator MerR -
SNSL254_RS00855 () 148361..149365 + 1005 WP_000427623.1 IS110-like element IS4321 family transposase -
SNSL254_RS24630 () 149642..149761 + 120 Protein_169 permease -
SNSL254_RS26880 () 149771..149887 + 117 WP_000338626.1 hypothetical protein -
SNSL254_RS00860 () 150008..150382 + 375 WP_000868820.1 hypothetical protein -
SNSL254_RS00865 () 150496..151221 + 726 WP_000988731.1 hypothetical protein -
SNSL254_RS00870 () 151354..155607 + 4254 WP_001257735.1 RHS domain-containing protein -
SNSL254_RS00875 () 155579..156019 + 441 WP_001326394.1 hypothetical protein -
SNSL254_RS26535 () 156190..156642 + 453 Protein_175 hypothetical protein -
SNSL254_RS00885 () 156658..157260 - 603 WP_000278322.1 hypothetical protein -
SNSL254_RS00890 () 157530..157811 + 282 WP_000575657.1 hypothetical protein -
SNSL254_RS00900 () 158110..158646 + 537 WP_000949433.1 hypothetical protein -
SNSL254_RS00905 () 158649..159659 + 1011 WP_000543934.1 tyrosine-type recombinase/integrase -
SNSL254_RS00910 () 159664..160533 + 870 WP_000997323.1 3'-5' exonuclease -
SNSL254_RS00915 () 160530..161021 + 492 WP_000139717.1 hypothetical protein -
SNSL254_RS00920 () 161348..162223 + 876 WP_001097010.1 DNA replication terminus site-binding protein -
SNSL254_RS00925 () 162385..163425 + 1041 WP_000101568.1 DNA-binding protein -
SNSL254_RS00935 () 163712..165223 + 1512 WP_000811656.1 UvrD-helicase domain-containing protein -
SNSL254_RS00940 () 165334..166374 + 1041 WP_001326396.1 conjugal transfer protein TraF -
SNSL254_RS00945 () 166376..167809 + 1434 WP_000256129.1 conjugal transfer protein TraH -
SNSL254_RS00950 () 167822..171436 + 3615 WP_000534551.1 conjugal transfer protein TraG N-terminal domain-containing protein -
SNSL254_RS00955 () 171474..171836 - 363 WP_000683483.1 hypothetical protein -
SNSL254_RS00960 () 172552..172824 + 273 WP_000356489.1 helix-turn-helix domain-containing protein -
SNSL254_RS00965 () 172824..173357 + 534 WP_000790610.1 transglycosylase SLT domain-containing protein -
SNSL254_RS00970 () 173368..173976 + 609 WP_000891157.1 hypothetical protein -
SNSL254_RS00975 () 173973..174523 + 551 Protein_192 regulator -
SNSL254_RS00980 () 174583..175002 - 420 WP_000651490.1 H-NS histone family protein -
SNSL254_RS00985 () 175004..175297 - 294 WP_000919078.1 hypothetical protein -
SNSL254_RS00990 () 175314..176297 - 984 WP_000077458.1 ParM/StbA family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance