NC_0085633305961..3498287

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 192327 bp
Accession: NC_008563        Location: 3305961..3498287         Organism: Escherichia coli APEC O1       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
APECO1_RS16795 () 3301670..3303805 - 2136 WP_000839776.1 ornithine decarboxylase -
APECO1_RS16800 () 3304204..3304911 + 708 WP_000234491.1 DUF554 domain-containing protein -
APECO1_RS16810 () 3305290..3306552 + 1263 WP_001218820.1 integrase arm-type DNA-binding domain-containing protein -
APECO1_RS16815 () 3307004..3310519 + 3516 WP_000344091.1 ATP-binding protein -
APECO1_RS31255 () 3310628..3312127 - 1500 WP_001026222.1 phosphoethanolamine transferase -
APECO1_RS16825 () 3312302..3313048 - 747 WP_001350744.1 porin family protein -
APECO1_RS16830 () 3313158..3313904 - 747 WP_001016261.1 IS21 family transposase ISEc12 Transposase
APECO1_RS16835 () 3313919..3315460 - 1542 WP_001298859.1 IS21 family transposase ISEc12 Transposase
APECO1_RS16840 () 3315994..3317004 - 1011 WP_000758687.1 Fimbrial adhesin PapG VF
APECO1_RS16845 () 3317048..3317548 - 501 WP_000620429.1 Minor fimbrial protein PrsF VF
APECO1_RS16850 () 3317623..3318144 - 522 WP_000723802.1 Fimbrial protein PapE VF
APECO1_RS16855 () 3318171..3318707 - 537 WP_000597711.1 Fimbrial adapter PapK VF
APECO1_RS16860 () 3318717..3319298 - 582 WP_000261303.1 hypothetical protein VF
APECO1_RS16865 () 3319335..3320069 - 735 WP_000265730.1 Chaperone protein PapD VF
APECO1_RS16870 () 3320140..3322650 - 2511 WP_000654932.1 Outer membrane usher protein PapC VF
APECO1_RS16875 () 3322709..3323296 - 588 WP_001350743.1 PAP fimbrial minor pilin protein VF
APECO1_RS16880 () 3323359..3323907 - 549 WP_000597759.1 Pap fimbrial major pilin protein VF
APECO1_RS16885 () 3324114..3324428 - 315 WP_000930062.1 Major pilu subunit operon regulatory protein PapB VF
APECO1_RS16895 () 3324860..3325093 + 234 WP_000006207.1 P fimbrial regulatory protein KS71A VF
APECO1_RS16905 () 3325436..3325672 - 237 WP_000958091.1 AlpA family transcriptional regulator -
APECO1_RS16910 () 3325741..3326316 - 576 WP_000991571.1 hypothetical protein -
APECO1_RS16915 () 3326574..3327140 - 567 WP_001126806.1 inovirus-type Gp2 protein -
APECO1_RS30525 () 3327487..3328694 + 1208 Protein_3223 IS3 family transposase ISEc48 Transposase
APECO1_RS16930 () 3328729..3329094 - 366 WP_000639467.1 hypothetical protein -
APECO1_RS16935 () 3329137..3330501 - 1365 WP_000948756.1 Phosphoglycerate transporter protein VF
APECO1_RS16940 () 3330900..3332117 + 1218 WP_001363624.1 phosphoglycerate transport regulator PgtC -
APECO1_RS16945 () 3332114..3334123 + 2010 WP_000790446.1 two-component system sensor histidine kinase PgtB -
APECO1_RS16950 () 3334113..3335360 + 1248 WP_001350739.1 two-component system response regulator PgtA -
APECO1_RS29135 () 3335607..3335720 + 114 Protein_3229 hypothetical protein -
APECO1_RS31740 () 3335752..3335844 + 93 Protein_3230 ATP-dependent helicase -
APECO1_RS16955 () 3335953..3336276 - 324 WP_015953064.1 hypothetical protein -
APECO1_RS16960 () 3336341..3336985 - 645 WP_001332013.1 hypothetical protein -
APECO1_RS16965 () 3337006..3337275 - 270 WP_000226516.1 PerC family transcriptional regulator -
APECO1_RS16970 () 3337354..3337999 - 646 Protein_3234 ParB N-terminal domain-containing protein -
APECO1_RS16975 () 3337984..3339216 - 1233 WP_000999383.1 phosphoadenosine phosphosulfate reductase -
APECO1_RS16980 () 3339352..3339996 - 645 WP_001013662.1 hypothetical protein -
APECO1_RS16985 () 3340190..3341638 - 1449 WP_001350737.1 AAA family ATPase -
APECO1_RS30535 () 3343024..3344236 + 1213 Protein_3239 IS256 family transposase -
APECO1_RS17010 () 3344416..3346464 - 2049 WP_000792544.1 TonB-dependent siderophore receptor IreA -
APECO1_RS17020 () 3347238..3347978 - 741 WP_001075450.1 inovirus Gp2 family protein -
APECO1_RS31630 () 3348083..3348331 + 249 WP_000573217.1 hypothetical protein -
APECO1_RS17030 () 3349670..3350458 + 789 WP_000816192.1 hypothetical protein -
APECO1_RS17035 () 3350455..3351405 - 951 WP_000157734.1 hypothetical protein -
APECO1_RS17040 () 3351511..3352395 + 885 WP_000010416.1 50S ribosome-binding GTPase -
APECO1_RS17050 () 3352598..3353278 + 681 WP_001282926.1 WYL domain-containing protein -
APECO1_RS17055 () 3353426..3354103 + 678 WP_001097312.1 hypothetical protein -
APECO1_RS17060 () 3354109..3354342 + 234 WP_001278287.1 DUF905 family protein -
APECO1_RS17065 () 3354432..3355250 + 819 WP_001175142.1 DUF945 domain-containing protein -
APECO1_RS17070 () 3355341..3355826 + 486 WP_000860054.1 antirestriction protein -
APECO1_RS17075 () 3355841..3356317 + 477 WP_001186756.1 RadC family protein -
APECO1_RS17080 () 3356386..3356607 + 222 WP_000692312.1 DUF987 domain-containing protein -
APECO1_RS17085 () 3356686..3357063 + 378 WP_015953067.1 type IV toxin-antitoxin system toxin CbtA Antitoxin Detail
APECO1_RS17090 () 3357110..3357487 + 378 WP_001094436.1 TA system toxin CbtA family protein Toxin Detail
APECO1_RS17095 () 3357484..3357972 + 489 WP_000761714.1 hypothetical protein -
APECO1_RS17100 () 3357984..3358181 + 198 WP_000839254.1 DUF957 domain-containing protein -
APECO1_RS17105 () 3358266..3359111 + 846 WP_001280513.1 DUF4942 domain-containing protein -
APECO1_RS17110 () 3359182..3360717 + 1536 WP_000492897.1 hypothetical protein VF
APECO1_RS17115 () 3361114..3361284 + 171 Protein_3259 IS110 family transposase ISEc32 Transposase
APECO1_RS17120 () 3362094..3363077 + 984 WP_024179273.1 Arabinose 5-phosphate isomerase KpsF VF
APECO1_RS17125 () 3363149..3364297 + 1149 WP_000905916.1 hypothetical protein VF
APECO1_RS17130 () 3364321..3365997 + 1677 WP_001331697.1 Polysialic acid transport protein KpsD VF
APECO1_RS17135 () 3366007..3366747 + 741 WP_000030755.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
APECO1_RS17140 () 3366744..3368771 + 2028 WP_000579525.1 hypothetical protein VF
APECO1_RS17145 () 3368806..3370011 + 1206 WP_001161829.1 hypothetical protein VF
APECO1_RS17150 () 3370161..3371390 - 1230 WP_000575410.1 hypothetical protein VF
APECO1_RS17155 () 3371380..3372528 - 1149 WP_000197083.1 hypothetical protein VF
APECO1_RS17160 () 3372521..3373696 - 1176 WP_000723250.1 Polysialic acid biosynthesis protein P7 VF
APECO1_RS17165 () 3373693..3374949 - 1257 WP_001259305.1 N-acylneuraminate cytidylyltransferase VF
APECO1_RS17170 () 3374949..3375989 - 1041 WP_000066000.1 N,N'-diacetyllegionaminic acid synthase VF
APECO1_RS17175 () 3375986..3376609 - 624 WP_000038461.1 Putative acetyltransferase EpsM VF
APECO1_RS17180 () 3376659..3377318 - 660 WP_000590258.1 Polysialic acid transport ATP-binding protein KpsT VF
APECO1_RS17185 () 3377315..3378091 - 777 WP_000124301.1 Polysialic acid transport protein KpsM VF
APECO1_RS17190 () 3379149..3379685 - 537 WP_000942802.1 Type II secretion system protein M VF
APECO1_RS17195 () 3379687..3380865 - 1179 WP_000097208.1 hypothetical protein VF
APECO1_RS17200 () 3380862..3381839 - 978 WP_000633202.1 Putative type II secretion system protein K VF
APECO1_RS17205 () 3381836..3382441 - 606 WP_001331694.1 Type II secretion system protein J VF
APECO1_RS17210 () 3382438..3382809 - 372 WP_000820096.1 hypothetical protein VF
APECO1_RS17215 () 3382806..3383369 - 564 WP_001115118.1 Type II secretion system protein H VF
APECO1_RS17220 () 3383373..3383828 - 456 WP_001087289.1 Type II secretion system protein G VF
APECO1_RS17225 () 3383845..3385068 - 1224 WP_001173408.1 Type II secretion system protein F VF
APECO1_RS17230 () 3385068..3386561 - 1494 WP_000249340.1 Type II secretion system protein E VF
APECO1_RS17235 () 3386561..3388621 - 2061 WP_000498846.1 Secretin GspD 2 VF
APECO1_RS17240 () 3388651..3389610 - 960 WP_001350730.1 Type II secretion system protein C 2 VF
APECO1_RS17245 () 3389628..3390038 - 411 WP_001298257.1 type II secretion system pilot lipoprotein GspS-beta -
APECO1_RS17250 () 3390104..3390913 - 810 WP_000895874.1 Prepilin peptidase PppA VF
APECO1_RS17255 () 3391077..3395639 - 4563 WP_001034562.1 hypothetical protein VF
APECO1_RS17265 () 3396123..3397805 - 1683 WP_000259302.1 glycolate permease GlcA -
APECO1_RS17270 () 3398161..3400332 - 2172 WP_000084100.1 malate synthase G -
APECO1_RS17275 () 3400354..3400758 - 405 WP_000853256.1 protein GlcG -
APECO1_RS17280 () 3400763..3401986 - 1224 WP_001194819.1 glycolate oxidase subunit GlcF -
APECO1_RS17285 () 3401997..3403049 - 1053 WP_000943074.1 glycolate oxidase subunit GlcE -
APECO1_RS17290 () 3403049..3404548 - 1500 WP_000026154.1 glycolate oxidase subunit GlcD -
APECO1_RS17295 () 3404799..3405563 + 765 WP_001314155.1 transcriptional regulator GlcC -
APECO1_RS17300 () 3405570..3406712 - 1143 WP_001331688.1 DNA-binding protein -
APECO1_RS17305 () 3407083..3408807 + 1725 WP_011703666.1 Long-chain-fatty-acid--AMP ligase FadD26 VF
APECO1_RS17310 () 3408804..3409718 + 915 WP_001077159.1 NAD-dependent epimerase/dehydratase family protein -
APECO1_RS17315 () 3409750..3409998 + 249 WP_000248098.1 acyl carrier protein -
APECO1_RS17320 () 3409998..3411170 + 1173 WP_000524959.1 8-amino-7-oxononanoate synthase VF
APECO1_RS17325 () 3411205..3412284 - 1080 WP_001331686.1 LPS export ABC transporter permease LptG -
APECO1_RS17330 () 3412281..3413351 - 1071 WP_000779629.1 LPS export ABC transporter permease LptF -
APECO1_RS17335 () 3413382..3413942 - 561 WP_001141149.1 YtfJ family protein -
APECO1_RS17340 () 3413942..3414778 - 837 WP_000984967.1 hypothetical protein -
APECO1_RS17345 () 3414778..3416127 - 1350 WP_000257922.1 lipopolysaccharide biosynthesis protein -
APECO1_RS17350 () 3416173..3416931 - 759 WP_001445422.1 hypothetical protein -
APECO1_RS17355 () 3416963..3417676 - 714 WP_001076282.1 thymidylate kinase -
APECO1_RS17360 () 3417851..3418543 + 693 WP_001190683.1 thymidylate kinase -
APECO1_RS17365 () 3418592..3420091 - 1500 WP_000933275.1 inorganic phosphate transporter PitB -
APECO1_RS17370 () 3420383..3422242 - 1860 WP_001331684.1 bifunctional glutathionylspermidine amidase/synthase -
APECO1_RS17375 () 3422447..3423313 + 867 WP_001331683.1 glutathione-dependent disulfide-bond oxidoreductase -
APECO1_RS17380 () 3423446..3423694 - 249 WP_000334896.1 hydrogenase maturation factor HybG -
APECO1_RS17385 () 3423707..3424048 - 342 WP_000544952.1 hydrogenase maturation nickel metallochaperone HypA -
APECO1_RS17390 () 3424041..3424529 - 489 WP_000134031.1 hydrogenase-2 assembly chaperone -
APECO1_RS17395 () 3424522..3425016 - 495 WP_001221940.1 HyaD/HybD family hydrogenase maturation endopeptidase -
APECO1_RS17400 () 3425016..3426719 - 1704 WP_000083065.1 hydrogenase 2 large subunit -
APECO1_RS17405 () 3426716..3427894 - 1179 WP_000017687.1 Ni/Fe-hydrogenase cytochrome b subunit -
APECO1_RS17410 () 3427884..3428870 - 987 WP_001081868.1 hydrogenase 2 operon protein HybA -
APECO1_RS17415 () 3428873..3429991 - 1119 WP_000145410.1 hydrogenase 2 small subunit -
APECO1_RS17425 () 3430180..3430467 - 288 WP_001059136.1 DUF2623 domain-containing protein -
APECO1_RS17430 () 3430586..3431473 - 888 WP_001350729.1 dienelactone hydrolase family protein -
APECO1_RS17435 () 3431630..3432670 + 1041 WP_000262189.1 L-glyceraldehyde 3-phosphate reductase -
APECO1_RS17440 () 3432710..3433204 - 495 WP_000439331.1 TIGR00645 family protein -
APECO1_RS17445 () 3433395..3434279 + 885 WP_000018758.1 putative oxidoreductase YghA VF
APECO1_RS17450 () 3434318..3434743 - 426 WP_001240712.1 TonB system transport protein ExbD -
APECO1_RS17455 () 3434750..3435484 - 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
APECO1_RS17465 () 3435736..3436923 + 1188 WP_000763935.1 cystathionine beta-lyase -
APECO1_RS17470 () 3437063..3437722 + 660 WP_000268419.1 DedA family protein -
APECO1_RS17475 () 3437762..3438661 - 900 WP_001298382.1 DNA-binding transcriptional regulator YqhC -
APECO1_RS17485 () 3438855..3440018 + 1164 WP_001058819.1 alcohol dehydrogenase -
APECO1_RS17490 () 3440123..3440950 + 828 WP_000013152.1 2,5-didehydrogluconate reductase DkgA -
APECO1_RS17495 () 3441150..3442076 + 927 WP_000691616.1 YbjP/YqhG family protein -
APECO1_RS17500 () 3442127..3442384 + 258 WP_000848521.1 lipoprotein YqhH -
APECO1_RS17505 () 3442426..3444645 - 2220 WP_000095186.1 YgiQ family radical SAM protein -
APECO1_RS17510 () 3444897..3445646 + 750 WP_000438655.1 FadR family transcriptional regulator -
APECO1_RS17515 () 3445969..3447441 + 1473 WP_001331680.1 mannitol dehydrogenase family protein -
APECO1_RS17520 () 3447438..3448454 + 1017 WP_000853926.1 zinc-binding alcohol dehydrogenase family protein -
APECO1_RS17525 () 3448465..3449475 + 1011 WP_000214536.1 putative oxidoreductase YjmC VF
APECO1_RS17530 () 3449548..3450531 + 984 WP_000645959.1 TRAP transporter substrate-binding protein -
APECO1_RS17535 () 3450573..3451055 + 483 WP_001259754.1 TRAP transporter small permease -
APECO1_RS17540 () 3451066..3452370 + 1305 WP_001298381.1 TRAP transporter large permease subunit -
APECO1_RS17545 () 3452441..3453853 - 1413 WP_000059395.1 cell division protein FtsP -
APECO1_RS17550 () 3453928..3454665 - 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
APECO1_RS17555 () 3454900..3457158 - 2259 WP_001281888.1 DNA topoisomerase IV subunit A -
APECO1_RS17560 () 3457296..3458903 - 1608 WP_011703671.1 ABC transporter substrate-binding protein -
APECO1_RS17565 () 3459012..3459494 - 483 WP_000183493.1 GyrI-like domain-containing protein -
APECO1_RS17570 () 3459547..3459939 - 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
APECO1_RS17575 () 3460091..3460750 + 660 WP_001221493.1 Transcriptional regulatory protein QseB VF
APECO1_RS17580 () 3460747..3462096 + 1350 WP_000673382.1 two-component system sensor histidine kinase QseC -
APECO1_RS17585 () 3462142..3462474 - 333 WP_000914696.1 DUF2645 family protein -
APECO1_RS31260 () 3462481..3463673 - 1193 Protein_3350 Hcp family type VI secretion system effector -
APECO1_RS17600 () 3463923..3464504 + 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
APECO1_RS17605 () 3464535..3464849 + 315 WP_000633738.1 antibiotic biosynthesis monooxygenase -
APECO1_RS17610 () 3464894..3465781 - 888 WP_000614943.1 MurR/RpiR family transcriptional regulator -
APECO1_RS17615 () 3465778..3466725 - 948 WP_001296418.1 iron-siderophore ABC transporter substrate-binding protein -
APECO1_RS17620 () 3466736..3467773 - 1038 WP_001298372.1 Iron-uptake system permease protein FeuC VF
APECO1_RS17625 () 3467782..3468765 - 984 WP_000986428.1 putative siderophore transport system permease protein YfiZ VF
APECO1_RS17630 () 3468762..3469571 - 810 WP_000940869.1 putative siderophore transport system ATP-binding protein YusV VF
APECO1_RS17635 () 3469945..3472086 + 2142 WP_001240663.1 TonB-dependent siderophore receptor -
APECO1_RS17640 () 3472150..3474042 - 1893 WP_000195274.1 DNA topoisomerase IV subunit B -
APECO1_RS17645 () 3474071..3474652 - 582 WP_000105733.1 esterase YqiA -
APECO1_RS17650 () 3474652..3475479 - 828 WP_000444744.1 3',5'-cyclic-AMP phosphodiesterase -
APECO1_RS17655 () 3475504..3475926 - 423 WP_000833393.1 DUF1249 family protein -
APECO1_RS17660 () 3475927..3476556 - 630 WP_000917117.1 ADP-ribose diphosphatase -
APECO1_RS17665 () 3476761..3478242 + 1482 WP_000735289.1 outer membrane channel protein TolC -
APECO1_RS17675 () 3478390..3479061 + 672 WP_000831543.1 DUF1190 family protein -
APECO1_RS17680 () 3479067..3480227 + 1161 WP_000442855.1 glutathionylspermidine synthase family protein -
APECO1_RS17685 () 3480712..3482508 + 1797 WP_000459865.1 aryl-sulfate sulfotransferase -
APECO1_RS17690 () 3482526..3483194 + 669 WP_000040022.1 thiol:disulfide interchange protein DsbA/DsbL -
APECO1_RS17695 () 3483209..3483880 + 672 WP_000511506.1 protein-disulfide oxidoreductase DsbI -
APECO1_RS17700 () 3483926..3484714 - 789 WP_001351039.1 4,5-DOPA dioxygenase extradiol -
APECO1_RS17705 () 3484857..3485630 + 774 WP_001295627.1 zinc transporter ZupT -
APECO1_RS31635 () 3485692..3485862 - 171 WP_001296421.1 hypothetical protein -
APECO1_RS17715 () 3486433..3486996 + 564 WP_000915007.1 putative fimbrial-like protein YbgD VF
APECO1_RS17720 () 3487083..3489605 + 2523 WP_001060674.1 Outer membrane usher protein PapC VF
APECO1_RS17725 () 3489621..3490361 + 741 WP_001351038.1 putative fimbrial chaperone YfcS VF
APECO1_RS17730 () 3490358..3491407 + 1050 WP_000631271.1 pilus protein -
APECO1_RS17735 () 3491461..3492114 - 654 WP_001076989.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
APECO1_RS17740 () 3492488..3492787 + 300 WP_001314168.1 ubiquinone biosynthesis accessory factor UbiK -
APECO1_RS17745 () 3492822..3493022 - 201 WP_001296424.1 cell surface composition regulator GlgS -
APECO1_RS17750 () 3493292..3493921 + 630 WP_000599932.1 DUF1449 family protein -
APECO1_RS17755 () 3493948..3495609 + 1662 WP_001298380.1 flotillin family protein -
- () 3495807..3495948 - 142 NuclAT_1 - -
- () 3495807..3495948 - 142 NuclAT_1 - -
- () 3495807..3495948 - 142 NuclAT_1 - -
- () 3495807..3495948 - 142 NuclAT_1 - -
APECO1_RS31265 () 3495849..3495908 + 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
APECO1_RS17765 () 3496028..3497461 - 1434 WP_000869177.1 Bifunctional protein HldE VF
APECO1_RS17770 () 3497509..3500349 - 2841 WP_001331677.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase -
APECO1_RS17775 () 3500372..3501673 - 1302 WP_000046243.1 inorganic triphosphatase -
APECO1_RS17785 () 3501915..3502535 + 621 WP_001125331.1 SH3 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance