MGE detailed information
MGE type: Genomic_island MGE length: 20683 bp
Accession: NC_008563 Location: 264457..285139 Organism: Escherichia coli APEC O1 Replicon: chromosome
Accession: NC_008563 Location: 264457..285139 Organism: Escherichia coli APEC O1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APECO1_RS01205 () | 260572..260997 | - | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
| APECO1_RS01210 () | 261002..262486 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| APECO1_RS01215 () | 262509..263012 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| APECO1_RS01220 () | 263718..264236 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| APECO1_RS01230 () | 264457..266439 | + | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| APECO1_RS01235 () | 266546..267592 | + | 1047 | WP_000571852.1 | DUF2169 domain-containing protein | - |
| APECO1_RS01240 () | 267585..269024 | + | 1440 | WP_000528853.1 | DUF4150 domain-containing protein | - |
| APECO1_RS01245 () | 268999..269289 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| APECO1_RS30090 () | 269547..270311 | + | 765 | Protein_240 | ISAs1 family transposase ISEc1 | Transposase |
| APECO1_RS01260 () | 270540..271043 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| APECO1_RS01265 () | 271137..271625 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| APECO1_RS30840 () | 271651..271845 | + | 195 | Protein_243 | transposase | - |
| APECO1_RS01270 () | 271896..272666 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| APECO1_RS01275 () | 272847..273293 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| APECO1_RS01280 () | 273336..275780 | - | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| APECO1_RS01285 () | 276020..276598 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| APECO1_RS01290 () | 276804..277571 | + | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| APECO1_RS01295 () | 277542..278282 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| APECO1_RS01300 () | 278594..279343 | + | 750 | WP_000093934.1 | hypothetical protein | VF |
| APECO1_RS01305 () | 279519..280016 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| APECO1_RS31485 () | 280099..280257 | - | 159 | WP_014639450.1 | hypothetical protein | - |
| APECO1_RS01310 () | 280336..282048 | - | 1713 | Protein_253 | Flagellar biosynthesis protein FlhA | VF |
| APECO1_RS01315 () | 282020..282805 | + | 786 | WP_000207544.1 | hypothetical protein | VF |
| APECO1_RS01320 () | 282876..283931 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| APECO1_RS01325 () | 283983..284276 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| APECO1_RS01330 () | 284279..284677 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| APECO1_RS01335 () | 284687..285139 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| APECO1_RS01340 () | 285329..286468 | + | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| APECO1_RS01345 () | 286465..287079 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| APECO1_RS01350 () | 287136..288593 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| APECO1_RS01355 () | 288854..289312 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - () | 289908..289988 | + | 81 | NuclAT_5 | - | - |
| - () | 289908..289988 | + | 81 | NuclAT_5 | - | - |
| - () | 289908..289988 | + | 81 | NuclAT_5 | - | - |
| - () | 289908..289988 | + | 81 | NuclAT_5 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|