MGE detailed information
MGE type: Prophage MGE length: 52048 bp
Accession: NC_008563 Location: 1322847..1374894 Organism: Escherichia coli APEC O1 Replicon: chromosome
Accession: NC_008563 Location: 1322847..1374894 Organism: Escherichia coli APEC O1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APECO1_RS06600 () | 1318042..1319046 | + | 1005 | WP_000994894.1 | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF | - |
| APECO1_RS06605 () | 1319099..1319428 | - | 330 | WP_000366957.1 | HI1450 family dsDNA-mimic protein | - |
| APECO1_RS06610 () | 1319463..1320923 | - | 1461 | WP_000214516.1 | cardiolipin synthase | - |
| APECO1_RS30960 () | 1321066..1321239 | + | 174 | WP_001309467.1 | YciY family protein | - |
| APECO1_RS06620 () | 1321294..1322547 | - | 1254 | WP_001313775.1 | voltage-gated potassium channel protein | - |
| APECO1_RS06625 () | 1322847..1323143 | - | 297 | WP_000967595.1 | YciI family protein | - |
| APECO1_RS06630 () | 1323367..1324083 | + | 717 | WP_001357407.1 | TonB system transport protein TonB | - |
| APECO1_RS06635 () | 1324123..1324521 | - | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| APECO1_RS06640 () | 1324627..1325166 | - | 540 | WP_000808672.1 | septation protein A | - |
| APECO1_RS06645 () | 1325196..1325939 | - | 744 | WP_000028546.1 | envelope biogenesis factor ElyC | - |
| APECO1_RS30965 () | 1325967..1326056 | - | 90 | Protein_1268 | YkgJ family cysteine cluster protein | - |
| APECO1_RS06650 () | 1326295..1326933 | + | 639 | WP_001350853.1 | outer membrane protein OmpW | - |
| APECO1_RS06655 () | 1326979..1328109 | - | 1131 | WP_000113674.1 | hypothetical protein ; Integrase | Integrase |
| APECO1_RS06660 () | 1328087..1328335 | - | 249 | WP_000113189.1 | excisionase | - |
| APECO1_RS06665 () | 1328400..1330871 | - | 2472 | WP_000048435.1 | exonuclease | - |
| APECO1_RS06670 () | 1330964..1331155 | - | 192 | WP_001090203.1 | DUF1482 family protein | - |
| APECO1_RS06675 () | 1331152..1331340 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| APECO1_RS30215 () | 1331741..1331905 | + | 165 | WP_001331716.1 | hypothetical protein | - |
| APECO1_RS06680 () | 1331906..1332127 | - | 222 | WP_001171970.1 | hypothetical protein | - |
| APECO1_RS06685 () | 1332287..1332442 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| APECO1_RS30970 () | 1332735..1333073 | - | 339 | WP_001362937.1 | peptidase S24 | - |
| APECO1_RS06695 () | 1333465..1333707 | + | 243 | WP_000747951.1 | hypothetical protein | - |
| APECO1_RS06700 () | 1333691..1334116 | + | 426 | WP_000693867.1 | Rha family transcriptional regulator | - |
| APECO1_RS06705 () | 1334188..1335246 | + | 1059 | WP_001262377.1 | hypothetical protein | - |
| APECO1_RS06710 () | 1335287..1335709 | + | 423 | WP_001151217.1 | DUF977 family protein | - |
| APECO1_RS06715 () | 1335901..1336863 | + | 963 | WP_014639476.1 | hypothetical protein | - |
| APECO1_RS06720 () | 1336879..1337880 | + | 1002 | WP_000354966.1 | hypothetical protein | - |
| - () | 1338428..1338486 | - | 59 | - | - | Antitoxin Detail |
| APECO1_RS06730 () | 1338498..1338653 | + | 156 | WP_000813256.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| APECO1_RS30235 () | 1338821..1339099 | + | 279 | WP_011478175.1 | hypothetical protein | - |
| APECO1_RS06740 () | 1339101..1340147 | + | 1047 | WP_001265108.1 | DUF968 domain-containing protein | - |
| APECO1_RS06745 () | 1340160..1340534 | + | 375 | WP_000904114.1 | RusA family crossover junction endodeoxyribonuclease | - |
| APECO1_RS06750 () | 1340531..1341352 | + | 822 | WP_000762880.1 | antitermination protein | - |
| APECO1_RS06755 () | 1341577..1341774 | + | 198 | WP_000917749.1 | hypothetical protein | - |
| APECO1_RS06760 () | 1341925..1342974 | + | 1050 | WP_000935515.1 | site-specific DNA-methyltransferase | - |
| APECO1_RS06780 () | 1343765..1343992 | + | 228 | WP_001331709.1 | DUF1737 domain-containing protein | - |
| APECO1_RS06785 () | 1344261..1344476 | + | 216 | WP_000372595.1 | class II holin family protein | - |
| APECO1_RS06790 () | 1344481..1344825 | + | 345 | WP_000193259.1 | YdfR family protein | - |
| APECO1_RS06795 () | 1344791..1345063 | - | 273 | WP_001351274.1 | hypothetical protein | - |
| APECO1_RS06800 () | 1345169..1345703 | + | 535 | Protein_1296 | lysozyme | - |
| APECO1_RS31525 () | 1345863..1346000 | + | 138 | WP_000459345.1 | hypothetical protein | - |
| APECO1_RS06805 () | 1346002..1346466 | + | 465 | WP_001082537.1 | lysis protein | - |
| APECO1_RS06810 () | 1346774..1347184 | - | 411 | WP_000057035.1 | DUF1398 family protein | - |
| APECO1_RS06815 () | 1347242..1347475 | - | 234 | WP_001331705.1 | YlcI/YnfO family protein | - |
| APECO1_RS06825 () | 1347863..1348411 | + | 549 | WP_000867575.1 | terminase small subunit | - |
| APECO1_RS06830 () | 1348383..1350311 | + | 1929 | WP_000622379.1 | phage terminase large subunit family protein | - |
| APECO1_RS06835 () | 1350295..1350501 | + | 207 | WP_000259002.1 | head-tail joining protein | - |
| APECO1_RS06840 () | 1350498..1352090 | + | 1593 | WP_000831818.1 | phage portal protein | - |
| APECO1_RS06845 () | 1352080..1353585 | + | 1506 | WP_001253963.1 | S49 family peptidase | - |
| APECO1_RS06850 () | 1353622..1353969 | + | 348 | WP_000256813.1 | head decoration protein | - |
| APECO1_RS06855 () | 1354027..1355055 | + | 1029 | WP_000522602.1 | major capsid protein | - |
| APECO1_RS06860 () | 1355107..1355490 | + | 384 | WP_000201495.1 | hypothetical protein | - |
| APECO1_RS06865 () | 1355483..1355836 | + | 354 | WP_001204554.1 | tail attachment protein | - |
| APECO1_RS06870 () | 1355852..1356385 | + | 534 | WP_000974980.1 | phage tail protein | - |
| APECO1_RS06875 () | 1356382..1356777 | + | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| APECO1_RS06880 () | 1356785..1357537 | + | 753 | WP_000235110.1 | phage tail protein | - |
| APECO1_RS06885 () | 1357551..1357982 | + | 432 | WP_000479095.1 | phage minor tail protein G | - |
| APECO1_RS06890 () | 1358009..1358422 | + | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| APECO1_RS06895 () | 1358403..1360976 | + | 2574 | WP_000082348.1 | phage tail tape measure protein | - |
| APECO1_RS06900 () | 1360973..1361302 | + | 330 | WP_000847402.1 | phage tail protein | - |
| APECO1_RS06905 () | 1361302..1362000 | + | 699 | WP_001152520.1 | phage minor tail protein L | - |
| APECO1_RS06915 () | 1362005..1362748 | + | 744 | WP_000140762.1 | C40 family peptidase | - |
| APECO1_RS06920 () | 1362685..1363287 | + | 603 | WP_000090879.1 | tail assembly protein | - |
| APECO1_RS31530 () | 1363361..1363699 | + | 339 | WP_001332187.1 | hypothetical protein | - |
| APECO1_RS06925 () | 1363766..1367245 | + | 3480 | WP_000515772.1 | host specificity protein J | - |
| APECO1_RS06930 () | 1367313..1367912 | + | 600 | WP_001233195.1 | Outer membrane protein X | VF |
| APECO1_RS06935 () | 1368064..1371171 | + | 3108 | WP_000216497.1 | phage tail protein | - |
| APECO1_RS06940 () | 1371171..1371755 | + | 585 | WP_000885580.1 | tail fiber assembly protein | - |
| APECO1_RS06945 () | 1371810..1372478 | - | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| APECO1_RS06950 () | 1372535..1372804 | + | 270 | WP_000937495.1 | tail fiber assembly protein | - |
| APECO1_RS31535 () | 1372919..1373089 | + | 171 | WP_000251936.1 | hypothetical protein | - |
| APECO1_RS28480 () | 1373393..1373518 | + | 126 | Protein_1328 | outer membrane protein OmpW | - |
| APECO1_RS06960 () | 1373577..1374083 | - | 507 | WP_001079492.1 | ferritin-like domain-containing protein | - |
| APECO1_RS06965 () | 1374129..1374629 | - | 501 | WP_001056507.1 | ferritin-like domain-containing protein | - |
| APECO1_RS06970 () | 1374715..1374894 | - | 180 | WP_000134814.1 | general stress protein | - |
| APECO1_RS06975 () | 1375275..1376081 | - | 807 | WP_000443098.1 | tryptophan synthase subunit alpha | - |
| APECO1_RS06980 () | 1376081..1377274 | - | 1194 | WP_000209529.1 | tryptophan synthase subunit beta | - |
| APECO1_RS06985 () | 1377286..1378644 | - | 1359 | WP_001195306.1 | bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|