MGE detailed information
MGE type: IScluster/Tn MGE length: 19432 bp
Accession: NC_007607 Location: 105382..124813 Organism: Shigella dysenteriae Sd197 Replicon: plasmid pSD1_197
Accession: NC_007607 Location: 105382..124813 Organism: Shigella dysenteriae Sd197 Replicon: plasmid pSD1_197
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SDY_RS23700 () | 101371..102117 | + | 747 | WP_000205723.1 | conjugal transfer pilus acetylase TraX | - |
| SDY_RS23705 () | 102172..102732 | + | 561 | WP_000139365.1 | fertility inhibition protein FinO | - |
| SDY_RS23710 () | 102863..103075 | + | 213 | WP_004971339.1 | ANR family transcriptional regulator | - |
| SDY_RS24540 () | 103319..103480 | + | 162 | Protein_121 | endonuclease | - |
| SDY_RS23715 () | 103496..104192 | - | 697 | Protein_122 | IS1 family transposase | - |
| SDY_RS23720 () | 104239..104557 | + | 319 | Protein_123 | thermonuclease family protein | - |
| SDY_RS23725 () | 104603..104811 | + | 209 | Protein_124 | hemolysin expression modulator Hha | - |
| SDY_RS23735 () | 105702..106214 | + | 513 | Protein_126 | DUF2726 domain-containing protein | - |
| SDY_RS23740 () | 106454..106714 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| SDY_RS23745 () | 106938..107012 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| SDY_RS23750 () | 107005..107862 | + | 858 | WP_000130974.1 | incFII family plasmid replication initiator RepA | - |
| SDY_RS23760 () | 108972..110180 | - | 1209 | WP_000198558.1 | IS91 family transposase ISSbo1 | Transposase |
| SDY_RS23765 () | 110161..110433 | - | 273 | WP_000019161.1 | hypothetical protein | - |
| SDY_RS24690 () | 110508..111305 | + | 798 | Protein_132 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| SDY_RS24695 () | 111288..111971 | + | 684 | Protein_133 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| SDY_RS23775 () | 112014..112537 | - | 524 | Protein_134 | IS3 family transposase ISSfl11 | Transposase |
| SDY_RS23780 () | 112605..113087 | - | 483 | WP_000405248.1 | GNAT family N-acetyltransferase | Toxin Detail |
| SDY_RS23785 () | 113078..113380 | - | 303 | WP_162147618.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| SDY_RS23790 () | 113794..114528 | - | 735 | Protein_137 | IS21 family transposase IS100kyp | Transposase |
| SDY_RS23795 () | 114661..115803 | - | 1143 | Protein_138 | IS91 family transposase ISSbo1 | Transposase |
| SDY_RS23800 () | 115784..116056 | - | 273 | WP_000019161.1 | hypothetical protein | - |
| SDY_RS23805 () | 116139..116663 | - | 525 | Protein_140 | IS66 family transposase ISSfl3 | Transposase |
| SDY_RS23810 () | 116800..116973 | - | 174 | WP_011379008.1 | transposase | - |
| SDY_RS23815 () | 117314..118768 | + | 1455 | WP_011379007.1 | hypothetical protein | VF |
| SDY_RS23825 () | 119107..120263 | + | 1157 | WP_134802187.1 | IS3 family transposase IS600 | Transposase |
| SDY_RS23830 () | 120307..121107 | + | 801 | Protein_144 | IS3 family transposase | - |
| SDY_RS23835 () | 121222..121563 | + | 342 | Protein_145 | IS4 family transposase ISEc13 | Transposase |
| SDY_RS24700 () | 121546..122383 | + | 838 | Protein_146 | IS4 family transposase ISEc13 | Transposase |
| SDY_RS23850 () | 122432..123628 | - | 1197 | WP_011379003.1 | IS110 family transposase ISEc20 | Transposase |
| SDY_RS23855 () | 123820..124813 | - | 994 | Protein_148 | IS21 family transposase IS100kyp | Transposase |
| SDY_RS23860 () | 126165..126944 | + | 780 | WP_024263024.1 | type III secretion system effector cysteine protease IpaJ | - |
| SDY_RS23865 () | 127894..128823 | - | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| SDY_RS23870 () | 129030..129266 | - | 237 | WP_000588956.1 | acyl carrier protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|