MGE detailed information
MGE type: Genomic_island MGE length: 13388 bp
Accession: NC_007384 Location: 285958..299345 Organism: Shigella sonnei Ss046 Replicon: chromosome
Accession: NC_007384 Location: 285958..299345 Organism: Shigella sonnei Ss046 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSON_RS01380 (281027) | 281027..285235 | + | 4209 | WP_000508696.1 | RHS element core protein | - |
| SSON_RS01385 (285247) | 285247..285696 | + | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| SSON_RS01395 (285958) | 285958..287094 | + | 1137 | Protein_256 | ISAs1 family transposase ISEc1 | Transposase |
| SSON_RS01405 (287132) | 287132..287542 | + | 411 | WP_162772774.1 | hypothetical protein | - |
| SSON_RS01410 (287542) | 287542..287919 | + | 378 | WP_001077737.1 | hypothetical protein | - |
| SSON_RS01415 (288388) | 288388..289524 | + | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| SSON_RS01420 (289566) | 289566..290336 | - | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| SSON_RS01425 (290517) | 290517..290963 | + | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| SSON_RS01430 (291006) | 291006..293450 | - | 2445 | WP_000973074.1 | Acyl-coenzyme A dehydrogenase | VF |
| SSON_RS01435 (293690) | 293690..294268 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| SSON_RS01440 (294474) | 294474..295241 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| SSON_RS01445 (295212) | 295212..295952 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| SSON_RS01450 (296108) | 296108..296386 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| SSON_RS01455 (296389) | 296389..296649 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| SSON_RS01460 (296835) | 296835..297608 | + | 774 | WP_127148796.1 | hypothetical protein | VF |
| SSON_RS32380 (298649) | 298649..298777 | + | 129 | Protein_270 | ISAs1 family transposase | - |
| SSON_RS01470 (298848) | 298848..299345 | + | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| SSON_RS01475 (299468) | 299468..301180 | - | 1713 | Protein_272 | flagellar biosynthesis protein FlhA | - |
| SSON_RS01480 (301152) | 301152..301937 | + | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| SSON_RS01485 (302008) | 302008..303063 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| SSON_RS01490 (303060) | 303060..303512 | + | 453 | WP_001059889.1 | GNAT family N-acetyltransferase | - |
| SSON_RS01495 (303758) | 303758..304279 | + | 522 | Protein_276 | RNA ligase RtcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|