MGE detailed information
MGE type: Genomic_island MGE length: 10410 bp
Accession: NC_007005 Location: 1004748..1015157 Organism: Pseudomonas syringae pv. syringae B728a Replicon: chromosome
Accession: NC_007005 Location: 1004748..1015157 Organism: Pseudomonas syringae pv. syringae B728a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSYR_RS04555 (Psyr_0877) | 1000107..1000757 | + | 651 | WP_003404753.1 | MotA/TolQ/ExbB proton channel family protein | - |
| PSYR_RS04560 (Psyr_0878) | 1000822..1002063 | + | 1242 | WP_011266685.1 | phospholipase | - |
| PSYR_RS04565 (Psyr_0879) | 1002118..1002603 | + | 486 | WP_011266686.1 | GNAT family N-acetyltransferase | - |
| PSYR_RS04570 (Psyr_0880) | 1002854..1004065 | + | 1212 | WP_011266687.1 | MltA domain-containing protein | - |
| PSYR_RS04575 | 1004184..1004649 | + | 466 | Protein_869 | cell division protein FtsQ | - |
| PSYR_RS04580 (Psyr_0883) | 1005013..1007049 | - | 2037 | WP_011266689.1 | S-type pyocin domain-containing protein | - |
| PSYR_RS04585 (Psyr_0884) | 1007353..1007814 | - | 462 | WP_011266690.1 | RES family NAD+ phosphorylase | - |
| PSYR_RS04590 (Psyr_0885) | 1007811..1008260 | - | 450 | WP_011266691.1 | DUF2384 domain-containing protein | - |
| PSYR_RS04595 (Psyr_0886) | 1008526..1009530 | + | 1005 | WP_011266692.1 | Protein-glutamate methylesterase/protein-glutamine glutaminase | VF |
| PSYR_RS04600 (Psyr_0887) | 1009534..1010016 | + | 483 | WP_003404789.1 | PAS domain-containing protein | - |
| PSYR_RS04605 (Psyr_0888) | 1010113..1011369 | + | 1257 | WP_011266693.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| PSYR_RS04610 (Psyr_0889) | 1011517..1011771 | + | 255 | WP_003404793.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| PSYR_RS04615 (Psyr_0890) | 1011768..1012115 | + | 348 | WP_011266694.1 | type II toxin-antitoxin system ChpB family toxin | - |
| PSYR_RS04620 (Psyr_0891) | 1012163..1012825 | - | 663 | WP_011266695.1 | ChrR family anti-sigma-E factor | - |
| PSYR_RS04625 (Psyr_0892) | 1012825..1013337 | - | 513 | WP_003345995.1 | sigma-70 family RNA polymerase sigma factor | - |
| PSYR_RS04630 | 1013573..1013761 | - | 189 | WP_057457743.1 | hypothetical protein | - |
| PSYR_RS04635 (Psyr_0893) | 1013760..1014335 | + | 576 | WP_011266696.1 | hypothetical protein | - |
| PSYR_RS04640 (Psyr_0894) | 1014523..1014927 | - | 405 | WP_011266697.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PSYR_RS04645 (Psyr_0895) | 1014927..1015157 | - | 231 | WP_011266698.1 | antitoxin | Antitoxin Detail |
| PSYR_RS04650 (Psyr_0896) | 1015273..1016154 | - | 882 | WP_011266699.1 | aldose 1-epimerase | - |
| PSYR_RS04655 (Psyr_0897) | 1016129..1017100 | - | 972 | WP_011266700.1 | DMT family transporter | - |
| PSYR_RS04660 (Psyr_0898) | 1017185..1018465 | - | 1281 | WP_003404808.1 | TRAP transporter large permease | - |
| PSYR_RS04665 (Psyr_0899) | 1018466..1018993 | - | 528 | WP_003404809.1 | TRAP transporter small permease | - |
| PSYR_RS04670 (Psyr_0900) | 1019056..1020081 | - | 1026 | WP_011266701.1 | TRAP transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|