MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 138742 bp
Accession: NC_006856 Location: 1..138742 Organism: Salmonella enterica subsp. enterica serovar Choleraesuis str. Replicon: plasmid pSC138
Accession: NC_006856 Location: 1..138742 Organism: Salmonella enterica subsp. enterica serovar Choleraesuis str. Replicon: plasmid pSC138
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SCH_RS23575 () | 1053..1460 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| SCH_RS23580 () | 1598..2482 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| SCH_RS23585 () | 2514..3713 | - | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| SCH_RS23590 () | 3819..4469 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| SCH_RS23595 () | 4501..4743 | - | 243 | WP_011264024.1 | relaxase | - |
| SCH_RS23600 () | 4801..5571 | - | 771 | Protein_6 | transposase | - |
| SCH_RS23605 () | 5814..8786 | - | 2973 | WP_001138073.1 | Tn3 family transposase | - |
| SCH_RS23610 () | 8789..9100 | - | 312 | Protein_8 | recombinase family protein | - |
| SCH_RS23615 () | 9165..9870 | + | 706 | Protein_9 | IS6-like element IS26 family transposase | - |
| SCH_RS23620 () | 10014..10655 | - | 642 | WP_001011939.1 | type A-2 chloramphenicol O-acetyltransferase CatII | - |
| SCH_RS23625 () | 10805..11305 | - | 501 | WP_001239317.1 | hypothetical protein | - |
| SCH_RS23630 () | 11385..12089 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SCH_RS26080 () | 12143..12952 | - | 810 | Protein_13 | DUF4158 domain-containing protein | - |
| SCH_RS23640 () | 12955..13440 | - | 486 | WP_001774155.1 | recombinase family protein | - |
| SCH_RS23645 () | 13480..14184 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SCH_RS23650 () | 14248..14634 | + | 387 | Protein_16 | recombinase family protein | - |
| SCH_RS23655 () | 14817..15678 | + | 862 | Protein_17 | class A broad-spectrum beta-lactamase TEM-1 | - |
| SCH_RS23660 () | 15842..17536 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| SCH_RS23665 () | 17554..17916 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| SCH_RS23670 () | 17913..18149 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| SCH_RS23675 () | 18185..18853 | + | 669 | WP_001300294.1 | EAL domain-containing protein | - |
| SCH_RS23680 () | 18928..20178 | + | 1251 | Protein_22 | transposase | - |
| SCH_RS23685 () | 20243..20947 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SCH_RS23690 () | 21137..21952 | - | 816 | WP_000018329.1 | aminoglycoside O-phosphotransferase APH(3')-Ia | - |
| SCH_RS23695 () | 22103..22822 | + | 720 | WP_024131417.1 | IS6-like element IS26 family transposase | - |
| SCH_RS23700 () | 22863..23114 | - | 252 | Protein_26 | recombinase family protein | - |
| SCH_RS23705 () | 23420..24433 | - | 1014 | WP_000845054.1 | class 1 integron integrase IntI1 | - |
| SCH_RS23710 () | 24578..25075 | + | 498 | WP_001083725.1 | trimethoprim-resistant dihydrofolate reductase DfrA12 | - |
| SCH_RS27260 () | 25187..25477 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| SCH_RS23715 () | 25483..26274 | + | 792 | WP_001206356.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 | - |
| SCH_RS23720 () | 26438..26785 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| SCH_RS23725 () | 26779..27618 | + | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| SCH_RS23730 () | 27746..28246 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| SCH_RS23735 () | 28215..29207 | - | 993 | WP_001381192.1 | TniB family NTP-binding protein | - |
| SCH_RS23740 () | 29385..30089 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SCH_RS23745 () | 30143..31627 | - | 1485 | Protein_36 | hybrid sensor histidine kinase/response regulator | - |
| SCH_RS23750 () | 31624..32112 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| SCH_RS23755 () | 32105..33088 | - | 984 | WP_001245143.1 | hypothetical protein | - |
| SCH_RS23760 () | 33092..34006 | - | 915 | WP_000891983.1 | response regulator | - |
| SCH_RS27485 () | 34320..34475 | + | 156 | WP_187148225.1 | hypothetical protein | - |
| SCH_RS23770 () | 34487..35191 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| SCH_RS23775 () | 35250..35489 | + | 240 | WP_011264039.1 | macrolide transporter | - |
| SCH_RS23780 () | 35635..36498 | + | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| SCH_RS23785 () | 36536..36781 | + | 246 | WP_001354008.1 | GrpB family protein | - |
| SCH_RS23790 () | 37250..38041 | + | 792 | WP_000034420.1 | sulfonamide-resistant dihydropteroate synthase Sul3 | - |
| SCH_RS27490 () | 38044..38319 | - | 276 | WP_109023896.1 | hypothetical protein | - |
| SCH_RS23795 () | 38321..38956 | + | 636 | Protein_47 | transposase | - |
| SCH_RS23800 () | 39221..39553 | - | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| SCH_RS23805 () | 39723..40514 | - | 792 | WP_001206316.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| SCH_RS23810 () | 40607..41866 | - | 1260 | WP_000095725.1 | chloramphenicol efflux MFS transporter CmlA1 | - |
| SCH_RS23815 () | 42128..42919 | - | 792 | WP_001261740.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 | - |
| SCH_RS23820 () | 42977..43585 | - | 609 | WP_000050382.1 | HAD-IB family hydrolase | - |
| SCH_RS23825 () | 43681..44523 | - | 843 | WP_001456218.1 | alpha/beta fold putative hydrolase EstX | - |
| SCH_RS23830 () | 44690..45703 | + | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| SCH_RS27270 () | 45906..46256 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| SCH_RS27275 () | 46382..46477 | + | 96 | Protein_56 | recombinase family protein | - |
| SCH_RS23845 () | 46541..47245 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SCH_RS27495 () | 47251..47391 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| SCH_RS23855 () | 47877..48614 | + | 738 | WP_001446887.1 | recombinase family protein | - |
| SCH_RS23860 () | 48611..48835 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| SCH_RS23865 () | 48957..49133 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| SCH_RS23875 () | 49264..49961 | + | 698 | Protein_62 | IS1 family transposase | - |
| SCH_RS23880 () | 50174..50815 | + | 642 | WP_000134999.1 | MBL fold metallo-hydrolase | - |
| SCH_RS23885 () | 51229..51924 | + | 696 | Protein_64 | APH(3'') family aminoglycoside O-phosphotransferase | - |
| SCH_RS23890 () | 51973..52677 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SCH_RS23895 () | 52737..53264 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| SCH_RS23900 () | 53264..53968 | - | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| SCH_RS23905 () | 53968..55257 | - | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| SCH_RS23910 () | 55260..56243 | - | 984 | WP_001191880.1 | IncI1-type conjugal transfer protein TraN | - |
| SCH_RS23915 () | 56254..56946 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| SCH_RS23920 () | 56943..57290 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| SCH_RS23925 () | 57308..57577 | - | 270 | Protein_72 | hypothetical protein | - |
| SCH_RS23930 () | 57632..58336 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| SCH_RS23935 () | 58402..60237 | + | 1836 | Protein_74 | IncI1-type conjugal transfer protein TraU | - |
| SCH_RS26145 () | 60237..60851 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| SCH_RS23940 () | 60818..62020 | + | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| SCH_RS23945 () | 62049..62633 | + | 585 | WP_001746157.1 | IncI1-type conjugal transfer protein TraX | - |
| SCH_RS23950 () | 62730..64898 | + | 2169 | WP_023518847.1 | DotA/TraY family protein | - |
| SCH_RS23955 () | 64969..65631 | + | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| SCH_RS23960 () | 65703..65912 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| SCH_RS27500 () | 66304..66480 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| SCH_RS23965 () | 66545..66841 | - | 297 | WP_011264046.1 | hypothetical protein | - |
| SCH_RS23970 () | 67141..67392 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| SCH_RS23975 () | 67464..67616 | - | 153 | WP_001387489.1 | Hok/Gef family protein | - |
| SCH_RS27290 () | 67931..68278 | + | 348 | Protein_85 | protein finQ | - |
| SCH_RS23985 () | 68464..69726 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| SCH_RS23990 () | 70050..71195 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| SCH_RS23995 () | 71289..71822 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| SCH_RS24000 () | 71819..72136 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| SCH_RS24005 () | 72365..73114 | + | 750 | Protein_90 | protein finQ | - |
| SCH_RS24010 () | 73421..74629 | + | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| SCH_RS24015 () | 74648..75718 | + | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| SCH_RS24020 () | 75711..78002 | + | 2292 | WP_011264051.1 | hypothetical protein | - |
| SCH_RS24025 () | 78040..80739 | - | 2700 | WP_011264053.1 | IncI1-type relaxase NikB | - |
| SCH_RS24030 () | 80750..81082 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| SCH_RS24035 () | 81316..81652 | + | 337 | Protein_96 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| SCH_RS24040 () | 81739..82587 | - | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| SCH_RS26150 () | 82936..83133 | + | 198 | WP_001161107.1 | hypothetical protein | - |
| SCH_RS24045 () | 83167..83418 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| SCH_RS24050 () | 83449..83655 | - | 207 | WP_000150314.1 | hypothetical protein | - |
| SCH_RS24055 () | 83717..84619 | - | 903 | WP_011264057.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| SCH_RS24060 () | 84616..85005 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| SCH_RS24065 () | 85182..85448 | - | 267 | WP_000804663.1 | hypothetical protein | - |
| SCH_RS24070 () | 85542..85976 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| SCH_RS24075 () | 86705..87205 | - | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| SCH_RS24080 () | 87667..88263 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| SCH_RS24085 () | 88260..88979 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| SCH_RS24090 () | 88976..89410 | - | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| SCH_RS24095 () | 89463..91421 | - | 1959 | WP_011264061.1 | ParB/RepB/Spo0J family partition protein | - |
| SCH_RS24100 () | 91480..91713 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| SCH_RS24105 () | 91771..92298 | - | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| SCH_RS26855 () | 92682..92996 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| SCH_RS24115 () | 93067..93258 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| SCH_RS24120 () | 93255..93677 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
| SCH_RS24125 () | 93724..94149 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| SCH_RS27295 () | 94567..95337 | - | 771 | WP_011264064.1 | hypothetical protein | - |
| SCH_RS24140 () | 95382..95816 | - | 435 | WP_011264065.1 | DUF1380 family protein | - |
| SCH_RS24145 () | 95830..96051 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| SCH_RS24150 () | 96052..96735 | - | 684 | WP_000086127.1 | DNA methylase | - |
| SCH_RS27300 () | 96811..97122 | - | 312 | WP_096035146.1 | hypothetical protein | - |
| SCH_RS24160 () | 97126..97548 | - | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| SCH_RS24165 () | 97551..98530 | - | 980 | Protein_122 | plasmid segregation protein ParM | - |
| SCH_RS24170 () | 98868..99203 | + | 336 | WP_001340323.1 | hypothetical protein | - |
| SCH_RS24175 () | 99298..100200 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| SCH_RS24180 () | 100618..100866 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| SCH_RS24185 () | 100863..101300 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| SCH_RS26200 () | 101300..101398 | + | 99 | Protein_127 | hypothetical protein | - |
| SCH_RS24190 () | 101499..103028 | + | 1530 | WP_001459668.1 | tyrosine-type recombinase/integrase | - |
| SCH_RS24195 () | 103028..104878 | + | 1851 | WP_011264068.1 | hypothetical protein | - |
| SCH_RS24200 () | 104875..106866 | + | 1992 | WP_011264069.1 | hypothetical protein | - |
| SCH_RS24205 () | 106868..107308 | + | 441 | WP_011264070.1 | hypothetical protein | - |
| SCH_RS24210 () | 107564..108523 | - | 960 | WP_011264071.1 | bacteriophage abortive infection AbiH family protein | - |
| SCH_RS24215 () | 108525..109625 | - | 1101 | WP_031619804.1 | DUF4935 domain-containing protein | - |
| SCH_RS24220 () | 110061..111149 | + | 1089 | WP_001459672.1 | hypothetical protein | - |
| SCH_RS24225 () | 111558..112736 | + | 1179 | Protein_135 | translesion error-prone DNA polymerase V subunit UmuC | - |
| SCH_RS24230 () | 112815..113066 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| SCH_RS24235 () | 113120..113425 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| SCH_RS24240 () | 114503..115474 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| SCH_RS24245 () | 115474..116639 | - | 1166 | Protein_139 | plasmid-partitioning protein SopA | - |
| SCH_RS24250 () | 117380..118390 | + | 1011 | WP_000200069.1 | replication initiation protein | - |
| SCH_RS24260 () | 119196..119525 | - | 330 | Protein_141 | lipocalin family protein | - |
| SCH_RS24265 () | 119643..120368 | + | 726 | WP_000331736.1 | MerR family transcriptional regulator | - |
| SCH_RS24270 () | 120468..120878 | + | 411 | WP_000750474.1 | hydroxyisourate hydrolase | - |
| SCH_RS24275 () | 120981..121940 | + | 960 | WP_000208727.1 | DUF523 and DUF1722 domain-containing protein | - |
| SCH_RS24280 () | 122086..123174 | + | 1089 | WP_000633445.1 | AAA family ATPase | - |
| SCH_RS24285 () | 123237..123941 | - | 705 | WP_001067852.1 | IS6-like element IS26 family transposase | - |
| SCH_RS24290 () | 124205..125278 | - | 1074 | WP_000557466.1 | hypothetical protein | - |
| SCH_RS27505 () | 125322..125471 | - | 150 | WP_000550473.1 | hypothetical protein | - |
| SCH_RS24300 () | 125813..126052 | + | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| SCH_RS24305 () | 126052..126339 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| SCH_RS24310 () | 126643..127425 | - | 783 | WP_001531258.1 | IS21-like element ISSen3 family helper ATPase IstB | - |
| SCH_RS24315 () | 127422..128444 | - | 1023 | WP_000627495.1 | IS21-like element ISSen3 family transposase | - |
| SCH_RS26220 () | 128583..128807 | + | 225 | Protein_153 | hypothetical protein | - |
| SCH_RS24320 () | 129244..131451 | + | 2208 | WP_001162839.1 | AAA family ATPase | - |
| SCH_RS24325 () | 131454..134036 | + | 2583 | WP_000449742.1 | hypothetical protein | - |
| SCH_RS24330 () | 134082..134339 | - | 258 | Protein_156 | Tn3 family transposase | - |
| SCH_RS24345 () | 136006..136983 | - | 978 | WP_000600827.1 | tyrosine-type recombinase/integrase | - |
| SCH_RS26235 () | 137175..137532 | + | 358 | Protein_159 | IS1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|