MGE detailed information
MGE type: IScluster/Tn MGE length: 20493 bp
Accession: NC_004851 Location: 32084..52576 Organism: Shigella flexneri 2a str. 301 Replicon: plasmid pCP301
Accession: NC_004851 Location: 32084..52576 Organism: Shigella flexneri 2a str. 301 Replicon: plasmid pCP301
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP0032 () | 28154..29134 | + | 981 | NP_858165.1 | plasmid segregation protein | - |
| CP0034 () | 29339..29521 | - | 183 | NP_858167.2 | hypothetical protein | - |
| CP0033 () | 29516..29875 | + | 360 | NP_858166.2 | transposase | - |
| CP0037 () | 31156..31551 | + | 396 | NP_858170.1 | hypothetical protein | - |
| CP0038 () | 31392..31811 | + | 420 | NP_858171.1 | hypothetical protein | - |
| CP0039 () | 32084..32752 | - | 669 | NP_858172.1 | IS3 family transposase IS629 | Transposase |
| CP0040 () | 32967..33293 | - | 327 | NP_858173.1 | IS3 family transposase IS629 | Transposase |
| CP0041 () | 33299..33706 | - | 408 | NP_858174.1 | IS150 ORF B | - |
| CP0042 () | 33762..33950 | + | 189 | NP_858175.1 | IS1294 transposase | - |
| CP0043 () | 33960..35159 | + | 1200 | NP_858176.1 | IS1294 transposase | - |
| CP0044 () | 35565..36086 | - | 522 | NP_858177.1 | IS3 family transposase IS150 | Transposase |
| CP0045 () | 36124..36507 | + | 384 | NP_858178.1 | IS21 family transposase IS100 | Transposase |
| CP0046 () | 36449..37237 | - | 789 | NP_858179.2 | transcriptional activator VirF | - |
| CP0047 () | 37780..38067 | + | 288 | NP_858180.1 | IS2 ORF2 | - |
| CP0048 () | 38249..38515 | + | 267 | YP_001449236.1 | hypothetical protein | VF |
| CP0050 () | 38612..38824 | - | 213 | NP_858183.2 | IS1 encoded protein | - |
| CP0049 () | 38753..38980 | + | 228 | NP_858182.2 | IS1 ORF1 | - |
| CP0051 () | 39007..39402 | + | 396 | NP_858184.1 | IS1 family transposase IS1X2 | Transposase |
| CP0054 () | 41197..42888 | + | 1692 | NP_858187.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| CP0055 () | 42940..43266 | + | 327 | NP_858188.1 | IS3 family transposase IS629 | Transposase |
| CP0056 () | 43481..44149 | + | 669 | NP_858189.1 | IS3 family transposase IS629 | Transposase |
| CP0057 () | 44189..44377 | - | 189 | NP_858190.1 | IS3 family transposase ISSfl11 | Transposase |
| CP0058 () | 44413..44715 | - | 303 | NP_858191.1 | IS3 family transposase ISSfl11 | Transposase |
| CP0059 () | 44783..45265 | - | 483 | NP_858192.1 | hypothetical protein | Toxin Detail |
| CP0060 () | 45256..45558 | - | 303 | NP_858193.2 | hypothetical protein | Antitoxin Detail |
| CP0060a () | 45830..46102 | + | 273 | YP_145811.1 | hypothetical protein | - |
| CP0061 () | 46083..47291 | + | 1209 | NP_858194.1 | IS91 family transposase ISSbo1 | Transposase |
| CP0062 () | 47361..47591 | + | 231 | NP_858195.1 | IS5 family transposase ISSfl7 | Transposase |
| CP0063 () | 47740..49194 | - | 1455 | NP_858196.1 | hypothetical protein | VF |
| CP0064 () | 49511..49708 | - | 198 | NP_858197.1 | IS1 encoded protein | - |
| CP0065 () | 49783..50241 | + | 459 | NP_858198.1 | IS1 family transposase IS1X2 | Transposase |
| CP0066 () | 50267..50593 | + | 327 | NP_858199.1 | IS3 family transposase IS629 | Transposase |
| CP0067 () | 50808..51476 | + | 669 | NP_858200.1 | IS3 family transposase IS629 | Transposase |
| CP0068 () | 51442..51930 | + | 489 | NP_858201.1 | IS66 family transposase ISEc23 | Transposase |
| CP0069 () | 51950..52576 | + | 627 | NP_858202.1 | IS21 family transposase ISEc10 | Transposase |
| CP0070 () | 52745..56839 | - | 4095 | NP_858203.1 | extracellular serine protease SepA | - |
| CP0071 () | 57241..57429 | + | 189 | NP_858204.1 | IS1294 transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|