MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 61561 bp
Accession: NC_004459 Location: 334698..396258 Organism: Vibrio vulnificus CMCP6 Replicon: chromosome
Accession: NC_004459 Location: 334698..396258 Organism: Vibrio vulnificus CMCP6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VV1_RS01665 () | 331086..331631 | - | 546 | WP_011078442.1 | tRNA adenosine(34) deaminase TadA | - |
| VV1_RS01670 () | 331668..332552 | - | 885 | WP_011078443.1 | LysR family transcriptional regulator | - |
| VV1_RS01675 () | 332705..333835 | + | 1131 | WP_011078444.1 | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | - |
| VV1_RS01680 () | 333885..334730 | + | 846 | WP_011078445.1 | S-formylglutathione hydrolase | - |
| VV1_RS01685 () | 334776..336335 | - | 1560 | WP_011078446.1 | AbgT family transporter | - |
| VV1_RS01690 () | 336615..337031 | - | 417 | WP_011078447.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| VV1_RS01695 () | 337021..338310 | - | 1290 | WP_043921071.1 | hypothetical protein | - |
| VV1_RS01700 () | 338310..338978 | - | 669 | WP_011078449.1 | hypothetical protein | - |
| VV1_RS01705 () | 338959..339471 | - | 513 | WP_011078450.1 | GspH/FimT family pseudopilin | - |
| VV1_RS01710 () | 339565..340008 | + | 444 | WP_080535723.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| VV1_RS01715 () | 340069..341214 | - | 1146 | WP_011078452.1 | molecular chaperone DnaJ | - |
| VV1_RS01720 () | 341424..343334 | - | 1911 | WP_011078453.1 | molecular chaperone DnaK | - |
| VV1_RS01725 () | 343575..344360 | - | 786 | WP_011078454.1 | zinc ABC transporter permease | - |
| VV1_RS01730 () | 344357..345256 | - | 900 | WP_011078455.1 | zinc ABC transporter substrate-binding protein | - |
| VV1_RS01735 () | 345240..346418 | - | 1179 | WP_011078456.1 | hypothetical protein | - |
| VV1_RS01740 () | 346558..347843 | + | 1286 | Protein_332 | hypothetical protein | - |
| VV1_RS01745 () | 347949..349229 | - | 1281 | WP_011078459.1 | dicarboxylate/amino acid:cation symporter | - |
| VV1_RS01750 () | 349555..350106 | - | 552 | WP_011078460.1 | nucleotide exchange factor GrpE | - |
| VV1_RS01755 () | 350252..351136 | + | 885 | WP_011078461.1 | NAD(+) kinase | - |
| VV1_RS01760 () | 351384..353048 | + | 1665 | WP_011078462.1 | DNA repair protein RecN | - |
| VV1_RS01765 () | 353227..353586 | + | 360 | WP_011078463.1 | outer membrane protein assembly factor BamE | - |
| VV1_RS01770 () | 353681..354034 | - | 354 | WP_011078464.1 | RnfH family protein | - |
| VV1_RS01775 () | 354031..354462 | - | 432 | WP_026050324.1 | ubiquinone-binding protein | - |
| VV1_RS01780 () | 354578..355063 | + | 486 | WP_011078466.1 | SsrA-binding protein SmpB | - |
| VV1_RS01785 () | 355729..357084 | + | 1356 | WP_133295519.1 | tyrosine-type recombinase/integrase | - |
| VV1_RS01790 () | 357549..357809 | + | 261 | WP_011078468.1 | AlpA family phage regulatory protein | - |
| VV1_RS01795 () | 357862..358365 | - | 504 | WP_011078469.1 | H-NS histone family protein | - |
| VV1_RS01800 () | 359003..359755 | + | 753 | WP_011078470.1 | hypothetical protein | - |
| VV1_RS01805 () | 359843..361348 | + | 1506 | WP_011078471.1 | relaxase/mobilization nuclease domain-containing protein | - |
| VV1_RS01810 () | 361536..362315 | + | 780 | WP_011078472.1 | hypothetical protein | - |
| VV1_RS01815 () | 362433..362690 | + | 258 | WP_011078473.1 | helix-turn-helix domain-containing protein | - |
| VV1_RS01820 () | 363013..363861 | + | 849 | WP_011078474.1 | hypothetical protein | - |
| VV1_RS01825 () | 363893..364141 | + | 249 | WP_133295491.1 | hypothetical protein | - |
| VV1_RS01830 () | 364141..364629 | + | 489 | WP_011078476.1 | hypothetical protein | - |
| VV1_RS01835 () | 364954..366660 | - | 1707 | WP_011078477.1 | AAA family ATPase | - |
| VV1_RS01840 () | 366773..367117 | - | 345 | WP_011078478.1 | hypothetical protein | - |
| VV1_RS24195 () | 367401..368253 | - | 853 | Protein_353 | IS3 family transposase | - |
| VV1_RS01855 () | 368419..368787 | + | 369 | WP_011078481.1 | hypothetical protein | - |
| VV1_RS01860 () | 368833..369237 | + | 405 | WP_011078482.1 | hypothetical protein | - |
| VV1_RS24495 () | 369626..369844 | - | 219 | WP_133295490.1 | hypothetical protein | - |
| VV1_RS01865 () | 370236..370649 | + | 414 | WP_011078484.1 | DNA polymerase V | - |
| VV1_RS01870 () | 370649..371905 | + | 1257 | WP_011078485.1 | Y-family DNA polymerase | - |
| VV1_RS01875 () | 372183..372845 | + | 663 | WP_011078486.1 | hypothetical protein | - |
| VV1_RS01880 () | 372846..373388 | + | 543 | WP_011078487.1 | ImmA/IrrE family metallo-endopeptidase | - |
| VV1_RS01885 () | 373385..374459 | + | 1075 | Protein_361 | beta family protein | - |
| VV1_RS01890 () | 374439..375062 | - | 624 | WP_011078490.1 | sce7726 family protein | - |
| VV1_RS01895 () | 375640..378201 | - | 2562 | WP_011078491.1 | AAA-like domain-containing protein | - |
| VV1_RS01900 () | 378198..379721 | - | 1524 | WP_011078492.1 | ATP-binding protein | - |
| VV1_RS01905 () | 381987..382697 | + | 711 | WP_011078493.1 | hypothetical protein | - |
| VV1_RS01910 () | 383290..385128 | - | 1839 | WP_011078494.1 | hypothetical protein | - |
| VV1_RS01920 () | 385528..385755 | + | 228 | WP_000743727.1 | hypothetical protein | - |
| VV1_RS01925 () | 385783..386040 | + | 258 | WP_011078495.1 | molecular chaperone DnaJ | - |
| VV1_RS01930 () | 386187..386447 | - | 261 | WP_011078496.1 | hypothetical protein | - |
| VV1_RS01935 () | 386501..386833 | - | 333 | WP_011078497.1 | hypothetical protein | - |
| VV1_RS01940 () | 387228..387464 | - | 237 | WP_133295488.1 | hypothetical protein | - |
| VV1_RS01945 () | 387457..389955 | - | 2499 | WP_011078498.1 | hypothetical protein | - |
| VV1_RS01955 () | 391907..393268 | + | 1362 | WP_043877077.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| VV1_RS01960 () | 393253..393735 | + | 483 | WP_029786578.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| VV1_RS01965 () | 394170..395912 | - | 1743 | WP_011078501.1 | lysophospholipid acyltransferase family protein | - |
| VV1_RS01970 () | 395955..396392 | - | 438 | WP_011078502.1 | YHS domain-containing protein | - |
| VV1_RS01975 () | 396407..397162 | - | 756 | WP_011078503.1 | NRDE family protein | - |
| VV1_RS01980 () | 397164..397718 | - | 555 | WP_011078504.1 | hypothetical protein | - |
| VV1_RS01985 () | 397742..398869 | - | 1128 | WP_011078505.1 | ATP-grasp domain-containing protein | - |
| VV1_RS01990 () | 398866..399495 | - | 630 | WP_011078506.1 | DedA family protein | - |
| VV1_RS01995 () | 399756..400742 | + | 987 | WP_011078507.1 | threonylcarbamoyl-AMP synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|