MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 93756 bp
Accession: NC_004368 Location: 1312217..1405972 Organism: Streptococcus agalactiae NEM316 Replicon: chromosome
Accession: NC_004368 Location: 1312217..1405972 Organism: Streptococcus agalactiae NEM316 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBS_RS06710 () | 1307407..1307868 | - | 462 | WP_000796045.1 | NUDIX hydrolase | - |
| GBS_RS06715 () | 1307858..1308340 | - | 483 | WP_000163512.1 | 8-oxo-dGTP diphosphatase | - |
| GBS_RS06720 () | 1308557..1311775 | + | 3219 | WP_000403400.1 | hyaluronate lyase | - |
| GBS_RS06725 () | 1311827..1312873 | - | 1047 | WP_000134282.1 | dTDP-glucose 4,6-dehydratase | - |
| GBS_RS06730 () | 1313080..1313673 | - | 594 | WP_000139163.1 | dTDP-4-dehydrorhamnose 3,5-epimerase family protein | - |
| GBS_RS06735 () | 1313687..1314541 | - | 855 | WP_011074736.1 | Glucose-1-phosphate thymidylyltransferase | VF |
| GBS_RS06740 () | 1314600..1315703 | - | 1104 | WP_000716840.1 | FAD-binding oxidoreductase | - |
| GBS_RS06745 () | 1315712..1316500 | - | 789 | WP_000647415.1 | Nif3-like dinuclear metal center hexameric protein | - |
| GBS_RS06750 () | 1316490..1317173 | - | 684 | WP_000365674.1 | tRNA (adenine(22)-N(1))-methyltransferase TrmK | - |
| GBS_RS06755 () | 1317277..1317957 | - | 681 | WP_000221656.1 | DnaD domain-containing protein | - |
| GBS_RS06760 () | 1318075..1318593 | - | 519 | WP_000365343.1 | adenine phosphoribosyltransferase | - |
| GBS_RS06765 () | 1318716..1321280 | - | 2565 | WP_001247505.1 | GBS Bsp-like repeat-containing protein | - |
| GBS_RS06770 () | 1321432..1323630 | - | 2199 | WP_000622237.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| GBS_RS06775 () | 1323627..1324388 | - | 762 | WP_000124583.1 | SDR family oxidoreductase | - |
| GBS_RS06780 () | 1324390..1325319 | - | 930 | WP_000405388.1 | ribonuclease Z | - |
| GBS_RS06785 () | 1325361..1326008 | - | 648 | WP_000568321.1 | cystathionine beta-lyase | - |
| GBS_RS06790 () | 1326001..1327239 | - | 1239 | WP_000573351.1 | GTPase HflX | - |
| GBS_RS06795 () | 1327330..1328220 | - | 891 | WP_001226480.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| GBS_RS06800 () | 1328331..1328507 | + | 177 | WP_000239229.1 | DUF3042 family protein | - |
| GBS_RS06805 () | 1328549..1329466 | - | 918 | WP_000800361.1 | TDT family transporter | - |
| GBS_RS06810 () | 1329601..1333359 | - | 3759 | WP_000823032.1 | pullulanase | - |
| GBS_RS06815 () | 1333528..1334262 | - | 735 | WP_001205490.1 | hypothetical protein | - |
| GBS_RS06820 () | 1334277..1334861 | - | 585 | WP_000130594.1 | uracil-DNA glycosylase family protein | - |
| GBS_RS06825 () | 1334958..1336364 | - | 1407 | WP_000150959.1 | dipeptidase PepV | - |
| GBS_RS06830 () | 1336411..1337013 | - | 603 | WP_000670189.1 | nitroreductase family protein | - |
| GBS_RS06835 () | 1337183..1338964 | + | 1782 | WP_000942620.1 | glycerophosphodiester phosphodiesterase | - |
| GBS_RS06840 () | 1339006..1340787 | - | 1782 | WP_001003953.1 | excinuclease ABC subunit UvrC | - |
| GBS_RS06845 () | 1340946..1341713 | + | 768 | WP_000567585.1 | epoxyqueuosine reductase QueH | - |
| GBS_RS06850 () | 1341772..1343112 | - | 1341 | WP_000285046.1 | MATE family efflux transporter | - |
| GBS_RS06855 () | 1343212..1343628 | - | 417 | WP_000245056.1 | VOC family protein | - |
| GBS_RS06860 () | 1343632..1344129 | - | 498 | WP_000582587.1 | hypothetical protein | - |
| GBS_RS06865 () | 1344351..1344947 | + | 597 | WP_000162275.1 | Ltp family lipoprotein | - |
| GBS_RS06875 () | 1345136..1346241 | + | 1106 | WP_088203057.1 | IS3 family transposase ISSag4 | Transposase |
| GBS_RS11330 () | 1346465..1347597 | + | 1133 | Protein_1292 | IS3 family transposase | - |
| GBS_RS06895 () | 1347637..1347876 | + | 240 | Protein_1293 | IS3 family transposase ISSag5 | Transposase |
| GBS_RS06900 () | 1348075..1350543 | - | 2469 | WP_000754577.1 | pneumococcal-type histidine triad protein | - |
| GBS_RS06905 () | 1350556..1351476 | - | 921 | WP_000715197.1 | High-affinity zinc uptake system binding-protein ZnuA | VF |
| GBS_RS06910 () | 1351712..1355164 | - | 3453 | WP_001227855.1 | C5a peptidase | VF |
| GBS_RS06915 () | 1355700..1356857 | - | 1158 | WP_161517632.1 | ISLre2 family transposase ISTeha1 | Transposase |
| GBS_RS11335 () | 1356965..1357986 | + | 1022 | Protein_1298 | IS3 family transposase ISSag4 | Transposase |
| GBS_RS06930 () | 1358178..1359992 | - | 1815 | WP_000007456.1 | 3'-5' exoribonuclease | - |
| GBS_RS06935 () | 1360408..1361643 | + | 1236 | WP_000248013.1 | hypothetical protein | - |
| GBS_RS06940 () | 1361845..1363026 | - | 1182 | WP_001284550.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GBS_RS06945 () | 1363044..1363277 | - | 234 | WP_000198709.1 | DUF3173 family protein | - |
| GBS_RS06950 () | 1363281..1363847 | - | 567 | WP_000031192.1 | replication protein | - |
| GBS_RS06955 () | 1363980..1364288 | - | 309 | WP_021075483.1 | hypothetical protein | - |
| GBS_RS06965 () | 1364595..1365104 | - | 510 | WP_000581745.1 | hypothetical protein | - |
| GBS_RS06970 () | 1365168..1365671 | - | 504 | WP_000161972.1 | hypothetical protein | - |
| GBS_RS06975 () | 1365671..1365985 | - | 315 | WP_000857661.1 | hypothetical protein | - |
| GBS_RS06980 () | 1366220..1367425 | - | 1206 | WP_000884910.1 | hypothetical protein | - |
| GBS_RS06985 () | 1367477..1367968 | - | 492 | WP_001129984.1 | hypothetical protein | - |
| GBS_RS06990 () | 1367982..1371593 | - | 3612 | WP_000974945.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| GBS_RS06995 () | 1371930..1373129 | - | 1200 | WP_000729210.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GBS_RS07000 () | 1373132..1373380 | - | 249 | WP_003036656.1 | DUF3173 family protein | - |
| GBS_RS07005 () | 1373653..1373874 | - | 222 | WP_000284845.1 | helix-turn-helix domain-containing protein | - |
| GBS_RS07010 () | 1374099..1374992 | - | 894 | WP_000234208.1 | aldose 1-epimerase family protein | - |
| GBS_RS07015 () | 1375092..1376498 | - | 1407 | WP_000169238.1 | 6-phospho-beta-galactosidase | - |
| GBS_RS07020 () | 1376585..1378291 | - | 1707 | WP_001037426.1 | lactose-specific PTS transporter subunit EIIC | - |
| GBS_RS07025 () | 1378291..1378608 | - | 318 | WP_001078314.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| GBS_RS07030 () | 1378637..1379470 | - | 834 | WP_000286428.1 | PRD domain-containing protein | - |
| GBS_RS07035 () | 1379863..1380843 | - | 981 | WP_000244543.1 | tagatose-bisphosphate aldolase | - |
| GBS_RS07040 () | 1380848..1381777 | - | 930 | WP_000604309.1 | tagatose-6-phosphate kinase | - |
| GBS_RS07045 () | 1381790..1382305 | - | 516 | WP_000684126.1 | galactose-6-phosphate isomerase subunit LacB | - |
| GBS_RS07050 () | 1382322..1382747 | - | 426 | WP_000974606.1 | galactose-6-phosphate isomerase subunit LacA | - |
| GBS_RS07055 () | 1382934..1383689 | - | 756 | WP_001032902.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| GBS_RS07060 () | 1383844..1385721 | - | 1878 | WP_000261786.1 | relaxase/mobilization nuclease domain-containing protein | - |
| GBS_RS07065 () | 1385708..1386073 | - | 366 | WP_000401241.1 | MobC family plasmid mobilization relaxosome protein | - |
| GBS_RS07070 () | 1386083..1386442 | - | 360 | WP_011074740.1 | hypothetical protein | - |
| GBS_RS07075 () | 1386777..1388795 | - | 2019 | WP_000222644.1 | ATP-dependent helicase | - |
| GBS_RS07080 () | 1388799..1391039 | - | 2241 | WP_000281027.1 | AAA family ATPase | - |
| GBS_RS07085 () | 1391052..1391822 | - | 771 | WP_000170758.1 | zeta toxin family protein | Toxin Detail |
| GBS_RS07090 () | 1391822..1392298 | - | 477 | WP_000578715.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| GBS_RS07095 () | 1392368..1392658 | - | 291 | WP_001210630.1 | hypothetical protein | - |
| GBS_RS07100 () | 1392705..1393094 | - | 390 | WP_000132515.1 | hypothetical protein | - |
| GBS_RS07105 () | 1393091..1393321 | - | 231 | WP_000110918.1 | hypothetical protein | - |
| GBS_RS07110 () | 1393376..1394461 | - | 1086 | WP_000161120.1 | toprim domain-containing protein | - |
| GBS_RS07115 () | 1394502..1395140 | - | 639 | WP_000932868.1 | hypothetical protein | - |
| GBS_RS07120 () | 1395305..1395604 | - | 300 | WP_001147539.1 | hypothetical protein | - |
| GBS_RS07125 () | 1395615..1395914 | - | 300 | WP_000084342.1 | hypothetical protein | - |
| GBS_RS07130 () | 1395986..1402186 | - | 6201 | WP_000102835.1 | DEAD/DEAH box helicase family protein | - |
| GBS_RS07135 () | 1402190..1402783 | - | 594 | WP_001015128.1 | hypothetical protein | - |
| GBS_RS07140 () | 1402834..1403385 | - | 552 | WP_000638315.1 | hypothetical protein | - |
| GBS_RS07145 () | 1403369..1403560 | - | 192 | WP_000377563.1 | hypothetical protein | - |
| GBS_RS07150 () | 1403561..1408465 | - | 4905 | WP_000208378.1 | LPXTG cell wall anchor domain-containing protein | - |
| GBS_RS07155 () | 1408678..1409268 | + | 591 | WP_000037314.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| GBS_RS07160 () | 1409265..1410113 | + | 849 | WP_001030310.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|