MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 96098 bp
Accession: NC_004307 Location: 234898..330995 Organism: Bifidobacterium longum NCC2705 Replicon: chromosome
Accession: NC_004307 Location: 234898..330995 Organism: Bifidobacterium longum NCC2705 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BL_RS00955 () | 230821..232056 | - | 1236 | WP_032742882.1 | AGE family epimerase/isomerase | - |
| BL_RS00960 () | 232123..233421 | - | 1299 | WP_003829550.1 | glycoside hydrolase family 125 protein | - |
| BL_RS00965 () | 233632..234528 | - | 897 | WP_011067996.1 | carbohydrate kinase | - |
| BL_RS00970 () | 234601..235815 | - | 1215 | WP_011067997.1 | ROK family transcriptional regulator | - |
| BL_RS00975 () | 236042..236956 | + | 915 | WP_011067998.1 | ROK family protein | - |
| BL_RS00980 () | 237106..238230 | - | 1125 | WP_010080889.1 | ROK family transcriptional regulator | - |
| BL_RS00985 () | 238568..239380 | + | 813 | WP_007052563.1 | glucosamine-6-phosphate deaminase | - |
| BL_RS00990 () | 239436..240719 | + | 1284 | WP_011067999.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| BL_RS00995 () | 240999..242633 | + | 1635 | WP_011068000.1 | ABC transporter substrate-binding protein | - |
| BL_RS01000 () | 242798..243889 | + | 1092 | WP_007052566.1 | ABC transporter permease | - |
| BL_RS01005 () | 243891..245060 | + | 1170 | WP_007052567.1 | ABC transporter permease | - |
| BL_RS01010 () | 245064..246773 | + | 1710 | WP_007052568.1 | Glutathione import ATP-binding protein GsiA | VF |
| BL_RS01015 () | 246823..247344 | - | 522 | WP_007057255.1 | NUDIX domain-containing protein | - |
| BL_RS01020 () | 247393..248988 | - | 1596 | WP_011068002.1 | aminopeptidase P family protein | - |
| BL_RS01025 () | 249292..250143 | - | 852 | WP_164928295.1 | hypothetical protein | - |
| BL_RS01030 () | 251397..252986 | + | 1590 | WP_011068005.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| BL_RS01035 () | 253047..256724 | + | 3678 | WP_011068006.1 | chromosome segregation protein SMC | - |
| BL_RS01040 () | 256843..257838 | - | 996 | WP_011068007.1 | GNAT family N-acetyltransferase | - |
| BL_RS01045 () | 257960..259513 | - | 1554 | WP_007054433.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase | - |
| BL_RS01050 () | 259652..260440 | + | 789 | WP_007054434.1 | sigma-70 family RNA polymerase sigma factor | - |
| BL_RS01055 () | 260440..260760 | + | 321 | WP_007054435.1 | hypothetical protein | - |
| BL_RS01060 () | 261026..261970 | - | 945 | WP_011068009.1 | aldose 1-epimerase family protein | - |
| BL_RS01065 () | 262095..263051 | - | 957 | WP_007054437.1 | aldose 1-epimerase family protein | - |
| BL_RS01070 () | 263276..264334 | + | 1059 | WP_011068010.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| BL_RS01075 () | 264374..264883 | - | 510 | WP_007054439.1 | Cys-tRNA(Pro) deacylase | - |
| BL_RS01080 () | 264977..266035 | - | 1059 | WP_007052589.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| BL_RS01085 () | 266276..267001 | - | 726 | WP_007054441.1 | thiamine diphosphokinase | - |
| BL_RS01090 () | 267103..267318 | + | 216 | WP_131223952.1 | hypothetical protein | - |
| BL_RS01095 () | 267233..268237 | + | 1005 | WP_007054442.1 | fused MFS/spermidine synthase | - |
| BL_RS01100 () | 268522..269244 | + | 723 | WP_032682519.1 | translation initiation factor IF-3 | - |
| BL_RS01105 () | 269225..269419 | + | 195 | WP_007052593.1 | 50S ribosomal protein L35 | - |
| BL_RS01110 () | 269472..269855 | + | 384 | WP_011068013.1 | 50S ribosomal protein L20 | - |
| BL_RS01115 () | 269970..270896 | + | 927 | WP_011068014.1 | Tyrosine recombinase XerD | VF |
| BL_RS01120 () | 271024..273870 | + | 2847 | WP_007054447.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| BL_RS01125 () | 274132..274971 | + | 840 | WP_010080876.1 | hypothetical protein | VF |
| BL_RS01130 () | 274990..275904 | + | 915 | WP_011068016.1 | segregation/condensation protein A | - |
| BL_RS01135 () | 275917..276633 | + | 717 | WP_011068017.1 | SMC-Scp complex subunit ScpB | - |
| BL_RS01140 () | 276765..277592 | + | 828 | WP_011068018.1 | NUDIX hydrolase | - |
| BL_RS01145 () | 277653..278933 | + | 1281 | WP_010080872.1 | quinolinate synthase NadA | - |
| BL_RS01150 () | 279021..280652 | + | 1632 | WP_011068019.1 | L-aspartate oxidase | - |
| BL_RS01155 () | 280656..281549 | + | 894 | WP_011068020.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| BL_RS01160 () | 281552..282799 | + | 1248 | WP_011068021.1 | cysteine desulfurase | - |
| BL_RS01165 () | 282831..284180 | + | 1350 | WP_011068022.1 | MFS transporter | - |
| BL_RS01170 () | 284495..286426 | + | 1932 | WP_007052606.1 | GTP-binding protein TypA/BipA | VF |
| BL_RS01175 () | 286526..286972 | + | 447 | WP_007052607.1 | alcohol dehydrogenase | - |
| BL_RS01180 () | 287052..288029 | + | 978 | WP_008783121.1 | chorismate mutase | - |
| BL_RS01185 () | 287987..289090 | + | 1104 | WP_077321923.1 | prephenate dehydrogenase/arogenate dehydrogenase family protein | - |
| BL_RS01190 () | 289302..289559 | + | 258 | WP_007052610.1 | hypothetical protein | - |
| BL_RS01195 () | 289594..290667 | + | 1074 | WP_007058617.1 | Tyrosine recombinase XerC | VF |
| BL_RS01200 () | 290920..292560 | + | 1641 | WP_011068025.1 | ABC transporter substrate-binding protein | - |
| BL_RS01205 () | 292861..293787 | + | 927 | WP_007052614.1 | ABC transporter permease | - |
| BL_RS01210 () | 293806..294810 | + | 1005 | WP_007052615.1 | ABC transporter permease | - |
| BL_RS01215 () | 294833..296842 | + | 2010 | WP_008783117.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| BL_RS01220 () | 296947..297807 | + | 861 | WP_007058594.1 | exodeoxyribonuclease III | - |
| BL_RS01225 () | 297875..298729 | + | 855 | WP_011068026.1 | DUF3710 domain-containing protein | - |
| BL_RS01230 () | 298745..299503 | + | 759 | WP_008783114.1 | DUF3159 domain-containing protein | - |
| BL_RS01235 () | 299493..300761 | + | 1269 | WP_007055251.1 | class I SAM-dependent RNA methyltransferase | - |
| BL_RS01240 () | 300773..301468 | + | 696 | WP_007055252.1 | hypothetical protein | - |
| BL_RS01245 () | 301559..304072 | + | 2514 | WP_011068028.1 | HAD-IC family P-type ATPase | - |
| BL_RS01250 () | 304193..306892 | + | 2700 | WP_011068029.1 | aconitate hydratase AcnA | - |
| BL_RS01255 () | 307038..307400 | + | 363 | WP_011068030.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BL_RS01260 () | 307400..307891 | + | 492 | WP_007054468.1 | PIN domain-containing protein | Toxin Detail |
| BL_RS01265 () | 307953..310058 | - | 2106 | WP_011068031.1 | DUF262 domain-containing protein | - |
| BL_RS01270 () | 310148..310789 | - | 642 | WP_007052627.1 | GNAT family N-acetyltransferase | - |
| BL_RS01275 () | 310829..311554 | - | 726 | WP_007056206.1 | Transcriptional regulatory protein LiaR | VF |
| BL_RS01280 () | 311589..312821 | - | 1233 | WP_007056207.1 | sensor histidine kinase | - |
| BL_RS01285 () | 313156..314001 | + | 846 | WP_007057205.1 | DUF5067 domain-containing protein | - |
| BL_RS01290 () | 314182..315081 | + | 900 | WP_007052631.1 | Bax inhibitor-1/YccA family protein | - |
| BL_RS01295 () | 315221..316237 | + | 1017 | WP_007052632.1 | DMT family transporter | - |
| BL_RS01300 () | 316270..317010 | - | 741 | WP_007056209.1 | hypothetical protein | VF |
| BL_RS01305 () | 317142..318596 | + | 1455 | WP_007052635.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| BL_RS01310 () | 318607..319593 | + | 987 | WP_007052636.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| BL_RS01315 () | 319627..320376 | - | 750 | WP_007056215.1 | hypothetical protein | VF |
| BL_RS01320 () | 320588..323497 | + | 2910 | WP_007052638.1 | DNA translocase FtsK | - |
| BL_RS01325 () | 323674..324309 | + | 636 | WP_007052639.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| BL_RS01330 () | 324321..324854 | + | 534 | WP_011068035.1 | CinA family protein | - |
| BL_RS01335 () | 324914..325429 | + | 516 | WP_007052641.1 | helix-turn-helix transcriptional regulator | - |
| BL_RS01340 () | 325541..325774 | + | 234 | WP_007052642.1 | DUF3046 domain-containing protein | - |
| BL_RS01345 () | 326075..327268 | + | 1194 | WP_007052644.1 | recombinase RecA | - |
| BL_RS01350 () | 327271..327864 | + | 594 | WP_008783103.1 | RecX family transcriptional regulator | - |
| BL_RS01360 () | 328741..329403 | + | 663 | WP_007052648.1 | ribosome-associated translation inhibitor RaiA | - |
| BL_RS01365 () | 329565..332459 | + | 2895 | WP_011068038.1 | preprotein translocase subunit SecA | - |
| BL_RS01370 () | 332770..333123 | - | 354 | WP_010080769.1 | transposase | - |
| BL_RS01380 () | 333713..334759 | + | 1047 | WP_011068039.1 | anthranilate phosphoribosyltransferase | - |
| BL_RS01385 () | 334809..334997 | + | 189 | WP_007054484.1 | hypothetical protein | - |
| BL_RS01390 () | 335151..335843 | - | 693 | WP_164928210.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|