| Effector Protein ID: 10954979 |
 T4SS name [ID] | VirB [6] |
| Gene symbol | tiorf159 |
| Locus tag | pTi-SAKURA_p161 |
| Strain | Agrobacterium tumefaciens plasmid pTi-SAKURA (NC_002147) |
| Replicon | plasmid pTi-SAKURA [GenBank: NC_002147] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 158773..161298 [+] |
| Product | hypothetical protein |
| Effector type | Protein |
| Descripton | VirD5 |
| T4CP requirement | T4CP Depedent |
| Target/Effection | VirD5 interacts with and stabilizes VirF in plants. |
| UniProt ID | Q9R6B6 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Agro_virD5 [PF04730], Evalue: 0, Aligned region: 63..218 Agro_virD5 [PF04730], Evalue: 0, Aligned region: 203..341 Agro_virD5 [PF04730], Evalue: 0, Aligned region: 333..841 |
| Protein Sequence: 841 a.a. [Download] |
| >gi|10954979|ref|NP_053399.1| hypothetical protein pTi-SAKURA_p161 [Agrobacterium tumefaciens] MRPSGNPNVDLSGSTASLAEVPAGATPVLNLIEPRNRPADDSLEGQTDRGEQPSASFDYDGMKLGAAERE AYENWCLSNRPTWKDLVLRARLDAIDSSAWLPDLGEESPLIFRYEGIPLGEGERQAYKEWQEEAQPTWED LVVNARMAVPDPCADVADEHNPLKEGEEFRSEASKRKRKKPIDQDENSPTSFYYDGMRLGEPEREAYDNW GNAEPPTWKDLVLKARLDAIDSSAWLFASEGSSSTFEYEGIPLGEGERQAYKEWQEDAQPTWEDLVINAR MAELEHPSWITDEHNSLEENLEFRPDARQASLKDSTDQRKSSSASFIYDGMKLGEPEHAAYENWSKPERP SWEALILDARQASIASSSVSNSLLAKTSSPVFLYEGMSLGDAERQAYGRWRQPAQPRWQNLVVNARLADL DPLAWIPDEHDPFAEAEALSPTSQSSGANKSNRALGNQSDSGRPAFAYLAAQEASHLQSPACSQLETRRA LNFGSPGPDANPTESIAKCNRLDGVSKIKRLGTKGRRAVNATIHGGKFGAQGLLSEDCGQAAEPSPSEQT TRPRTDNIGTYASRKNERARLATETGKYESEHIFGFKVVHDTLRATKEGRRLERPMPAYLEYKELHRQHV GTGRGRTGLVGRGWPDDASYRADQRATLSDPVASAEGATASNGYQLNQLGYAHQLATHGLQSETPDGVTM PIQVATISYNYTVSRDPVLSPPSKEQAPPLLHLGPRGQTEAVLARETALTGKWPTLERECQVYQRFLALY DVKKDLDAKQLGVRQKKQALVAALNRTAGLIGASPLEAQSSTAKVEYTTDEPDERRVYDPRDRGRDKAFN R |
| - |
| Nucleotide Sequence: 2526 bp [Download] |
| >gi|10954820|ref|NC_002147.1|:158773-161298 Agrobacterium tumefaciens MAFF301001 plasmid pTi-SAKURA, complete sequence ATGAGACCTTCAGGAAACCCGAACGTCGATCTTAGCGGTTCGACTGCATCGCTTGCCGAAGTTCCCGCCG GAGCTACCCCTGTCCTTAATCTAATCGAGCCCAGGAACCGTCCGGCTGACGACTCGCTTGAGGGCCAAAC CGATCGCGGCGAGCAACCATCTGCATCATTTGACTATGATGGCATGAAGCTTGGCGCCGCGGAGCGTGAA GCATACGAGAACTGGTGTCTATCGAACCGGCCTACATGGAAAGATCTGGTACTCAGGGCGCGCCTTGATG CAATCGACAGTTCCGCTTGGCTCCCCGATTTGGGCGAGGAGTCGCCTTTGATCTTCAGATATGAAGGGAT TCCGCTGGGTGAGGGGGAACGGCAAGCCTACAAAGAATGGCAAGAGGAGGCTCAGCCCACATGGGAAGAC CTCGTTGTCAACGCACGAATGGCGGTACCTGATCCTTGTGCTGACGTTGCAGACGAGCACAATCCCCTCA AAGAAGGCGAGGAGTTTCGGTCTGAAGCGTCGAAACGCAAGCGGAAAAAACCGATCGACCAGGACGAGAA TTCTCCTACATCGTTTTACTATGACGGGATGAGGCTCGGAGAACCCGAGCGCGAGGCATATGATAACTGG GGCAACGCGGAGCCGCCCACGTGGAAAGACCTGGTACTTAAGGCGCGCCTTGATGCAATTGACAGCTCCG CCTGGCTCTTTGCTTCAGAAGGGTCTTCCTCGACTTTTGAGTATGAGGGAATTCCACTGGGTGAGGGGGA ACGGCAAGCCTACAAAGAATGGCAAGAGGACGCTCAGCCCACGTGGGAGGACCTCGTCATTAATGCACGC ATGGCAGAACTCGAACATCCTTCTTGGATTACAGACGAACACAATTCCCTTGAAGAAAACTTAGAGTTTC GGCCCGATGCAAGACAGGCCAGCCTGAAGGACTCGACCGACCAGCGGAAGAGTTCTTCCGCGTCATTTAT CTATGATGGAATGAAGCTCGGGGAACCCGAGCATGCTGCATACGAGAACTGGAGCAAACCGGAACGACCG TCATGGGAAGCCCTCATCCTAGATGCGCGCCAGGCTTCCATAGCAAGCTCTTCGGTTTCGAATTCGTTAC TTGCAAAGACATCCTCGCCAGTCTTTCTATACGAGGGAATGTCGCTAGGGGATGCGGAACGTCAAGCGTA TGGAAGGTGGAGGCAGCCTGCCCAACCGCGATGGCAAAATCTTGTGGTGAACGCGCGCCTTGCGGATCTT GATCCGTTGGCCTGGATTCCCGATGAACATGATCCGTTTGCGGAAGCCGAGGCGCTTAGCCCCACTTCGC AATCGAGTGGCGCCAACAAGTCCAACCGCGCTTTGGGTAATCAATCAGATTCAGGCCGGCCCGCCTTCGC ATATCTGGCAGCACAAGAGGCGAGTCACCTGCAATCACCGGCATGCTCACAATTGGAAACGAGGCGTGCA TTAAATTTCGGGTCGCCTGGACCGGATGCAAATCCAACGGAAAGCATCGCCAAATGTAATCGTTTGGATG GCGTCAGTAAAATTAAGCGATTAGGCACCAAAGGCCGCCGGGCAGTAAACGCGACTATTCACGGCGGCAA GTTCGGTGCGCAAGGACTGTTGTCCGAAGATTGCGGACAAGCGGCTGAGCCCTCTCCGTCGGAACAAACT ACTCGGCCGCGAACCGATAATATTGGTACCTATGCAAGCCGGAAAAACGAACGAGCTCGGCTGGCTACAG AGACCGGGAAATACGAATCGGAGCACATTTTCGGATTTAAGGTCGTCCACGATACTTTGCGGGCGACCAA AGAAGGCCGTCGTCTCGAAAGGCCAATGCCGGCATACCTCGAATACAAGGAGCTTCATCGGCAACACGTA GGGACAGGAAGAGGACGGACTGGACTGGTCGGGCGCGGATGGCCAGATGATGCGAGCTATCGCGCAGATC AAAGGGCAACCCTGTCGGACCCTGTTGCGTCCGCGGAAGGTGCAACAGCTTCAAATGGGTACCAGTTGAA CCAGCTGGGCTACGCGCACCAGCTCGCCACCCATGGTCTCCAAAGTGAAACGCCCGATGGGGTTACCATG CCAATTCAAGTTGCGACAATTAGCTACAACTATACAGTGAGTCGTGATCCGGTCCTTTCACCACCCAGCA AAGAACAAGCGCCCCCATTGCTACACCTTGGGCCTCGTGGGCAAACGGAAGCTGTGCTTGCCCGCGAGAC CGCATTGACCGGAAAATGGCCAACTCTCGAGCGTGAGTGTCAAGTGTATCAGCGGTTTTTGGCCCTGTAC GACGTAAAGAAGGATCTGGACGCCAAACAACTTGGTGTACGGCAGAAAAAGCAGGCACTCGTTGCGGCGT TGAACCGGACCGCCGGCTTAATTGGCGCGTCACCTTTGGAAGCTCAATCGTCGACCGCTAAGGTTGAATA TACTACCGACGAGCCCGATGAACGACGGGTTTATGATCCGCGCGATCGAGGCAGAGACAAAGCGTTCAAT CGCTGA |
| Reference |
| (1) Hattori Y; Iwata K; Suzuki K; Uraji M; Ohta N; Katoh A; Yoshida K (2001). Sequence characterization of the vir region of a nopaline type Ti plasmid, pTi-SAKURA. Genes Genet Syst. 76(2):121-30. [PudMed:11434457] |