| Effector Protein ID: 10954953 |
 T4SS name [ID] | VirB [6] |
| Gene symbol | tiorf133 |
| Locus tag | pTi-SAKURA_p135 |
| Strain | Agrobacterium tumefaciens plasmid pTi-SAKURA (NC_002147) |
| Replicon | plasmid pTi-SAKURA [GenBank: NC_002147] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 129189..130127 [+] |
| Product | hypothetical protein |
| Effector type | Protein |
| Descripton | VirF |
| T4CP requirement | T4CP Depedent |
| Target/Effection | VirF may be involved in targeted proteolysis of proteins, such as certain Virulence effector proteins, that must be stripped from T-strands prior to or during T-DNA integration. |
| UniProt ID | O50245 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | NA |
| Protein Sequence: 312 a.a. [Download] |
| >gi|10954953|ref|NP_053373.1| hypothetical protein pTi-SAKURA_p135 [Agrobacterium tumefaciens] MEPSQRSLSDESEASRTEVHSTSTNRDMPPELLAKVATYIPTQDPVETARNLGSLERTGRAGREAVTSDP VGKYHARMKRIGASAKTVFDTVIPGNQLPEWETNRPSPTARTRAVGPILKFQSEAGKSRFVTNILNLPES AQCDAILSVIKHLNDLGEANKTRLIERSIEILRLEPPLTWNMGQKCPAVDVLVQGEKYLNADQLARIQQE RSSRPRLSPLFGRAIADFEVQKTMDANPRRYRDAAGPEVRAVDTVIETIERYSASLARGGPNAVGLLTTN ESFEKNINEVYNRTRAELDASSRDRSRSGLSR |
| - |
| Nucleotide Sequence: 939 bp [Download] |
| >gi|10954820|ref|NC_002147.1|:129189-130127 Agrobacterium tumefaciens MAFF301001 plasmid pTi-SAKURA, complete sequence ATGGAGCCCAGCCAACGAAGCTTAAGTGATGAATCCGAAGCGTCCCGTACGGAAGTCCATTCTACATCGA CAAATAGGGATATGCCTCCCGAGCTTTTGGCTAAGGTGGCAACTTATATTCCTACCCAGGACCCGGTAGA AACGGCACGAAATCTTGGAAGCCTGGAACGTACAGGGCGTGCAGGTCGTGAAGCCGTTACAAGTGATCCC GTCGGAAAATATCACGCGCGAATGAAACGAATTGGCGCCTCCGCCAAAACCGTGTTCGATACGGTCATTC CCGGAAATCAATTACCTGAGTGGGAGACGAACCGACCCTCTCCGACGGCCAGAACGCGAGCCGTTGGCCC AATTCTTAAGTTCCAGTCTGAAGCGGGAAAATCGAGATTTGTCACCAATATACTCAATTTGCCTGAATCT GCTCAGTGCGACGCAATTCTTAGTGTCATAAAACACTTGAATGATCTTGGTGAAGCAAACAAGACGCGAC TTATCGAACGCTCTATCGAAATTTTGCGGCTAGAACCCCCTTTGACCTGGAATATGGGCCAGAAATGCCC TGCGGTCGACGTGCTGGTCCAAGGCGAAAAGTACCTAAATGCGGATCAACTGGCTCGCATACAACAAGAG AGGAGCAGCCGTCCGCGGCTGTCTCCCCTGTTTGGCCGAGCCATAGCCGATTTCGAGGTTCAAAAAACCA TGGACGCAAATCCTAGACGATATAGGGACGCGGCGGGGCCTGAGGTCAGAGCTGTAGACACAGTAATTGA GACAATTGAGAGATATAGTGCGTCGTTAGCAAGAGGCGGTCCAAATGCAGTGGGACTCCTAACGACGAAC GAAAGCTTTGAGAAAAATATCAATGAGGTCTACAACCGTACGCGAGCCGAGCTAGACGCTTCTTCACGTG ACAGAAGTCGCTCTGGACTATCGCGATAA |
| Reference |
| (1) Hattori Y; Iwata K; Suzuki K; Uraji M; Ohta N; Katoh A; Yoshida K (2001). Sequence characterization of the vir region of a nopaline type Ti plasmid, pTi-SAKURA. Genes Genet Syst. 76(2):121-30. [PudMed:11434457] |