SecReT4

T4SS
References

T4SS ID	78
Strain	Acidovorax sp. JS42
Replicon	plasmid pAOVO02 [Browse all T4SS(s) in this replicon]
Accession	NC_008766
Location	11889..23824; 58677..61114
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	1	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	1	1	1	1	1

The information of T4SS components from NC_008766
Region 1: 11889..23824

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Ajs_4253	7308..8171 [+], 864	121582559	type II DNA restriction endonuclease R.NGOI
2	Ajs_4254	8338..8544 [+], 207	121582560	hypothetical protein
3	Ajs_4255	8608..8841 [-], 234	121582561	hypothetical protein
4	Ajs_4257	9010..9540 [-], 531	121582562	hypothetical protein
5	Ajs_4258	9619..10293 [-], 675	121582563	phage DNA methylase
6	Ajs_4259	10449..10880 [-], 432	121582564	hypothetical protein
7	Ajs_4260	10896..11594 [-], 699	121582565	conjugal transfer protein TrbP
8	Ajs_4261	11594..11860 [-], 267	121582566	hypothetical protein
9	Ajs_4262	11889..12524 [-], 636	121582567	conjugal transfer protein TrbN	TrbN
10	Ajs_4263	12538..13122 [-], 585	121582568	conjugal transfer protein TrbM
11	Ajs_4264	13139..14872 [-], 1734	121582569	TrbL/VirB6 plasmid conjugal transfer protein	TrbL
12	Ajs_4265	14883..15110 [-], 228	121582570	entry exclusion protein TrbK	TrbK
13	Ajs_4266	15120..15884 [-], 765	121582571	conjugal transfer protein TrbJ	TrbJ
14	Ajs_4267	15902..17320 [-], 1419	121582572	conjugal transfer protein TrbI	TrbI
15	Ajs_4268	17325..17813 [-], 489	121582573	conjugal transfer protein TrbH	TrbH
16	Ajs_4269	17816..18715 [-], 900	121582574	conjugal transfer protein TrbG	TrbG
17	Ajs_4270	18733..19515 [-], 783	121582575	conjugal transfer protein TrbF	TrbF
18	Ajs_4271	19512..22070 [-], 2559	121582576	conjugal transfer protein TrbE	TrbE
19	Ajs_4272	22067..22378 [-], 312	121582577	conjugal transfer protein TrbD	TrbD
20	Ajs_4273	22382..22846 [-], 465	121582578	conjugal transfer protein TrbC	TrbC
21	Ajs_4274	22859..23824 [-], 966	121582579	conjugal transfer ATPase TrbB	TrbB
22	Ajs_4275	24135..24497 [-], 363	121582580	conjugal transfer protein TrbA
23	Ajs_4276	24606..24944 [+], 339	121582581	single-strand binding protein
24	Ajs_4277	24992..26215 [+], 1224	121582582	TrfA family protein
25	Ajs_4278	26399..26614 [-], 216	121582583	hypothetical protein

Region 2: 58677..61114

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Ajs_4311	54011..54736 [-], 726	121582608	conjugal transfer protein TraL
2	Ajs_4312	54736..55155 [-], 420	121582609	TraK protein of DNA transfer system
3	Ajs_4313	55518..55739 [+], 222	121582610	hypothetical protein
4	Ajs_4314	55744..56115 [+], 372	121582611	conjugal transfer relaxosome component TraJ
5	Ajs_4315	56150..58408 [+], 2259	121582612	conjugal transfer relaxase TraI
6	Ajs_4316	58405..58680 [+], 276	121582613	putative entry/exclusion protein TrbK
7	Ajs_4317	58677..60581 [+], 1905	121582614	conjugal transfer coupling protein TraG	TraG
8	Ajs_4318	60578..61114 [+], 537	121582615	conjugal transfer peptidase TraF	TraF
9	Ajs_4319	61129..63192 [+], 2064	121582616	DNA topoisomerase III
10	Ajs_4320	63217..63609 [+], 393	121582617	conjugal transfer protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_008766