SecReT4

T4SS
References

T4SS ID	772
Strain	Polaromonas sp. JS666
Replicon	plasmid 2 [Browse all T4SS(s) in this replicon]
Accession	NC_007950
Location	207754..224107
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	0	0	0	1

The information of T4SS components from NC_007950

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Bpro_5451	203078..204748 [-], 1671	91791253	type II and III secretion system protein
2	Bpro_5452	204748..205647 [-], 900	91791254	hypothetical protein
3	Bpro_5453	206044..206472 [-], 429	91791255	hypothetical protein
4	Bpro_5454	206474..207748 [-], 1275	91791256	hypothetical protein
5	Bpro_5455	207754..209022 [-], 1269	91791257	conjugation TrbI-like protein	TrbI
6	Bpro_5456	209012..209818 [-], 807	91791258	conjugal transfer protein TrbG/VirB9/CagX	TrbG
7	Bpro_5457	209815..210585 [-], 771	91791259	Type IV secretory pathway component VirB8-like	TrbF
8	Bpro_5458	210630..211013 [-], 384	91791260	hypothetical protein
9	Bpro_5459	211014..211505 [-], 492	91791261	hypothetical protein
10	Bpro_5460	211518..211796 [-], 279	91791262	hypothetical protein
11	Bpro_5461	211831..213564 [-], 1734	91791263	AAA ATPase, central region
12	Bpro_5462	214194..214436 [-], 243	91791264	hypothetical protein
13	Bpro_5463	214433..215689 [-], 1257	91791265	hypothetical protein
14	Bpro_5464	215686..216561 [-], 876	91791266	hypothetical protein	TrbJ
15	Bpro_5465	216575..219127 [-], 2553	91791267	Type IV secretory pathway VirB4 components-like	TrbE
16	Bpro_5466	219121..219420 [-], 300	91791268	type IV secretory pathway, VirB3-like	TrbD
17	Bpro_5467	219427..219792 [-], 366	91791269	hypothetical protein	TrbC
18	Bpro_5468	219897..220871 [-], 975	91791270	type II secretion system protein E	TrbB
19	Bpro_5469	220959..221603 [-], 645	91791271	hypothetical protein
20	Bpro_5470	221600..221971 [-], 372	91791272	hypothetical protein
21	Bpro_5471	222200..224107 [-], 1908	91791273	hypothetical protein	TraG
22	Bpro_5472	224110..225945 [-], 1836	91791274	hypothetical protein
23	Bpro_5473	226031..226624 [-], 594	91791275	hypothetical protein
24	Bpro_5474	226628..226933 [-], 306	91791276	hypothetical protein
25	Bpro_5475	226974..227351 [-], 378	91791277	hypothetical protein
26	Bpro_5476	227939..229000 [+], 1062	91791278	tRNA 2-selenouridine synthase

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Mattes TE; Alexander AK; Richardson PM; Munk AC; Han CS; Stothard P; Coleman NV (2008). The genome of Polaromonas sp. strain JS666: insights into the evolution of a hydrocarbon- and xenobiotic-degrading bacterium, and features of relevance to biotechnology. Appl Environ Microbiol. 74(20):6405-16. [PudMed:18723656]