SecReT4

T4SS
References

T4SS ID	771
Strain	Polaromonas sp. JS666
Replicon	plasmid 1 [Browse all T4SS(s) in this replicon]
Accession	NC_007949
Location	331277..347589
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	0	1	0	1

The information of T4SS components from NC_007949

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Bpro_5220	326904..327608 [-], 705	91791028	hypothetical protein
2	Bpro_5221	327794..328402 [+], 609	91791029	hypothetical protein
3	Bpro_5222	328450..329163 [+], 714	91791030	hypothetical protein
4	Bpro_5223	329796..331277 [+], 1482	91791031	hypothetical protein
5	Bpro_5224	331277..333229 [+], 1953	91791032	hypothetical protein	TraG
6	Bpro_5225	333849..334487 [+], 639	91791033	hypothetical protein
7	Bpro_5226	334590..335588 [+], 999	91791034	type II secretion system protein E	TrbB
8	Bpro_5227	335625..336008 [+], 384	91791035	hypothetical protein	TrbC
9	Bpro_5228	336009..336314 [+], 306	91791036	hypothetical protein	TrbD
10	Bpro_5229	336326..338866 [+], 2541	91791037	Type IV secretory pathway VirB4 components-like	TrbE
11	Bpro_5230	338853..339632 [+], 780	91791038	hypothetical protein	TrbJ
12	Bpro_5231	339646..341064 [+], 1419	91791039	TrbL/VirB6 plasmid conjugal transfer protein
13	Bpro_5232	341141..343207 [+], 2067	91791040	AAA ATPase, central region
14	Bpro_5233	343201..343812 [+], 612	91791041	lytic transglycosylase, catalytic	TrbN
15	Bpro_5234	343935..344357 [+], 423	91791042	hypothetical protein
16	Bpro_5235	344538..345269 [+], 732	91791043	Type IV secretory pathway component VirB8-like	TrbF
17	Bpro_5236	345269..346141 [+], 873	91791044	conjugal transfer protein TrbG/VirB9/CagX	TrbG
18	Bpro_5237	346138..347589 [+], 1452	91791045	conjugation TrbI-like protein	TrbI
19	Bpro_5238	347586..348899 [+], 1314	91791046	hypothetical protein
20	Bpro_5239	348911..349312 [+], 402	91791047	putative type IV pilus biosynthesis protein
21	Bpro_5240	349309..351009 [+], 1701	91791048	type II and III secretion system protein
22	Bpro_5241	351031..352323 [+], 1293	91791049	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Mattes TE; Alexander AK; Richardson PM; Munk AC; Han CS; Stothard P; Coleman NV (2008). The genome of Polaromonas sp. strain JS666: insights into the evolution of a hydrocarbon- and xenobiotic-degrading bacterium, and features of relevance to biotechnology. Appl Environ Microbiol. 74(20):6405-16. [PudMed:18723656]