SecReT4

T4SS
References

T4SS ID	76
Strain	Burkholderia ambifaria AMMD
Replicon	plasmid 1 [Browse all T4SS(s) in this replicon]
Accession	NC_008385
Location	17502..43562
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	1	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	1	1	1	1	1

The information of T4SS components from NC_008385

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Bamb_6607	12919..13359 [-], 441	115345499	conjugal transfer protein TraM
2	Bamb_6608	13359..14084 [-], 726	115345500	conjugal transfer protein TraL
3	Bamb_6609	14084..14482 [-], 399	115345501	TraK protein of DNA transfer system
4	Bamb_6610	14856..15230 [+], 375	115345502	conjugal transfer relaxosome component TraJ
5	Bamb_6611	15265..17505 [+], 2241	115345503	conjugal transfer relaxase TraI
6	Bamb_6612	17502..19415 [+], 1914	115345504	conjugal transfer coupling protein TraG	TraG
7	Bamb_6613	19412..19948 [+], 537	115345505	conjugal transfer peptidase TraF	TraF
8	Bamb_6614	19960..22023 [+], 2064	115345506	DNA topoisomerase III
9	Bamb_6615	22045..22434 [+], 390	115345507	conjugal transfer protein
10	Bamb_6616	22438..26784 [+], 4347	115345508	hypothetical protein
11	Bamb_6617	27075..28976 [+], 1902	115345509	transposase Tn3 family protein
12	Bamb_6618	29073..29453 [-], 381	115345510	hypothetical protein
13	Bamb_6619	29539..30036 [-], 498	115345511	hypothetical protein
14	Bamb_6620	30191..30622 [-], 432	115345512	hypothetical protein
15	Bamb_6621	30638..31336 [-], 699	115345513	conjugal transfer protein TrbP
16	Bamb_6622	31336..31602 [-], 267	115345514	hypothetical protein
17	Bamb_6623	31631..32266 [-], 636	115345515	conjugal transfer protein TrbN	TrbN
18	Bamb_6624	32280..32867 [-], 588	115345516	conjugal transfer protein TrbM
19	Bamb_6625	32885..34603 [-], 1719	115345517	TrbL/VirB6 plasmid conjugal transfer protein	TrbL
20	Bamb_6626	34614..34841 [-], 228	115345518	entry exclusion protein TrbK	TrbK
21	Bamb_6627	34851..35615 [-], 765	115345519	conjugal transfer protein TrbJ	TrbJ
22	Bamb_6628	35636..37057 [-], 1422	115345520	conjugal transfer protein TrbI	TrbI
23	Bamb_6629	37062..37550 [-], 489	115345521	conjugal transfer protein TrbH	TrbH
24	Bamb_6630	37553..38452 [-], 900	115345522	conjugal transfer protein TrbG	TrbG
25	Bamb_6631	38470..39252 [-], 783	115345523	conjugal transfer protein TrbF	TrbF
26	Bamb_6632	39249..41807 [-], 2559	115345524	conjugal transfer protein TrbE	TrbE
27	Bamb_6633	41804..42115 [-], 312	115345525	conjugal transfer protein TrbD	TrbD
28	Bamb_6634	42119..42583 [-], 465	115345526	conjugal transfer protein TrbC	TrbC
29	Bamb_6635	42600..43562 [-], 963	115345527	conjugal transfer ATPase TrbB	TrbB

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_008385