T4SS ID	759
Strain	Pseudomonas aeruginosa LESB58
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_011770
Location	2842975..2870430
Name	Tfc
Function	conjugation
Classification	Type IVC; Type G
Bioinformatics investigation has been performed on this T4SS.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	1	1	1	1	1	0	0	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	1	1	1	0	1	0	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	1

The information of T4SS components from NC_011770
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	PLES_26401	2838131..2839003 [+], 873	218891367	2-dehydro-3-deoxyphosphooctonate aldolase
2	PLES_26421	2839054..2840925 [-], 1872	218891368	Relaxase
3	PLES_26431	2841242..2841868 [+], 627	218891369	hypothetical protein
4	PLES_26441	2841881..2842513 [+], 633	218891370	hypothetical protein
5	PLES_26451	2842598..2842963 [+], 366	218891371	hypothetical protein
6	PLES_26461	2842975..2844495 [-], 1521	218891372	hypothetical protein	Tfc19
7	PLES_26471	2844511..2844882 [-], 372	218891373	hypothetical protein
8	PLES_26481	2844879..2846276 [-], 1398	218891374	hypothetical protein	Tfc22
9	PLES_26491	2846286..2847233 [-], 948	218891375	hypothetical protein	Tfc23
10	PLES_26501	2847230..2847622 [-], 393	218891376	hypothetical protein	Tfc24
11	PLES_26511	2847839..2848333 [-], 495	218891377	RadC family DNA repair protein
12	PLES_26521	2848516..2849301 [-], 786	218891378	hypothetical protein
13	PLES_26531	2849315..2852200 [-], 2886	218891379	hypothetical protein	Tfc16
14	PLES_26541	2852621..2854039 [-], 1419	218891380	hypothetical protein	Tfc14
15	PLES_26551	2854937..2855629 [-], 693	218891381	hypothetical protein	Tfc12
16	PLES_26561	2855626..2855958 [-], 333	218891382	hypothetical protein	Tfc11
17	PLES_26571	2856049..2856408 [-], 360	218891383	hypothetical protein	Tfc10
18	PLES_26581	2856425..2856658 [-], 234	218891384	hypothetical protein
19	PLES_26591	2856655..2857038 [-], 384	218891385	plasmid Ignore, RAQPRD family	Tfc9
20	PLES_26601	2857242..2857712 [+], 471	218891386	excisionase family DNA binding domain
21	PLES_26611	2857709..2858284 [+], 576	218891387	hypothetical protein
22	PLES_26621	2858302..2859216 [+], 915	218891388	AAA ATPase
23	PLES_26631	2859680..2860180 [+], 501	218891389	hypothetical protein
24	PLES_26641	2860180..2861082 [+], 903	218891390	hypothetical protein
25	PLES_26651	2861121..2861846 [+], 726	218891391	hypothetical protein
26	PLES_26661	2861898..2864480 [+], 2583	218891392	chromosome segregation ATPase
27	PLES_26671	2865267..2867456 [-], 2190	218891393	hypothetical protein	Tfc6
28	PLES_26681	2867461..2867964 [-], 504	218891394	hypothetical protein	Tfc5
29	PLES_26691	2868006..2868575 [-], 570	218891395	hypothetical protein	Tfc4
30	PLES_26701	2868578..2869315 [-], 738	218891396	hypothetical protein	Tfc3
31	PLES_26711	2869328..2869972 [-], 645	218891397	putative secreted protein
32	PLES_26721	2869969..2870430 [-], 462	218891398	putative secreted protein	Tfc2
33	PLES_26731	2870707..2872986 [-], 2280	218891399	hypothetical protein
34	PLES_26741	2873123..2873428 [-], 306	218891400	hypothetical protein
35	PLES_26751	2873518..2873838 [-], 321	218891401	hypothetical protein
36	PLES_26761	2873889..2874998 [-], 1110	218891402	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICEPaeLESB58-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]

This literature contains bioinformatics investigation