SecReT4

T4SS
References

T4SS ID	744
Strain	Pseudomonas putida F1
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_009512
Location	3314704..3338815
Name	Tfc
Function	NA
Classification	Type IVC; Type G
This T4SS is identified in this study.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	1	1	1	1	1	0	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	0

The information of T4SS components from NC_009512

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Pput_2925	3312372..3312905 [+], 534	148548135	hypothetical protein
2	Pput_2926	3312973..3313230 [+], 258	148548136	hypothetical protein
3	Pput_2927	3313297..3313791 [+], 495	148548137	DNA repair protein RadC
4	Pput_2928	3313857..3314573 [+], 717	148548138	hypothetical protein
5	Pput_2929	3314704..3315219 [+], 516	148548139	hypothetical protein	Tfc2
6	Pput_2930	3315216..3315887 [+], 672	148548140	hypothetical protein
7	Pput_2931	3315898..3316617 [+], 720	148548141	hypothetical protein	Tfc3
8	Pput_2932	3316599..3317153 [+], 555	148548142	lytic transglycosylase subunit	Tfc4
9	Pput_2933	3317150..3317569 [+], 420	148548143	hypothetical protein	Tfc5
10	Pput_2934	3317579..3319705 [+], 2127	148548144	hypothetical protein	Tfc6
11	Pput_2935	3319740..3320468 [+], 729	148548145	hypothetical protein	Tfc8
12	Pput_2936	3320560..3320943 [-], 384	148548146	glutathione-dependent formaldehyde-activating protein
13	Pput_2937	3321033..3321989 [+], 957	148548147	LysR family transcriptional regulator
14	Pput_2938	3322222..3322512 [-], 291	148548148	hypothetical protein
15	Pput_2939	3323046..3323438 [-], 393	148548149	NUDIX hydrolase
16	Pput_2940	3323684..3324043 [+], 360	148548150	hypothetical protein	Tfc9
17	Pput_2941	3324030..3324269 [+], 240	148548151	hypothetical protein
18	Pput_2942	3324285..3324662 [+], 378	148548152	hypothetical protein
19	Pput_2943	3324670..3325071 [+], 402	148548153	hypothetical protein	Tfc11
20	Pput_2944	3325068..3325709 [+], 642	148548154	hypothetical protein	Tfc12
21	Pput_2945	3325706..3326512 [+], 807	148548155	hypothetical protein	Tfc13
22	Pput_2946	3326502..3328010 [+], 1509	148548156	hypothetical protein	Tfc14
23	Pput_2947	3327973..3328392 [+], 420	148548157	hypothetical protein	Tfc15
24	Pput_2948	3328392..3331133 [+], 2742	148548158	Type IV secretory pathway VirB4 components-like protein	Tfc16
25	Pput_2949	3331271..3331480 [-], 210	148548159	hypothetical protein
26	Pput_2950	3331462..3332736 [-], 1275	148548160	DNA-directed DNA polymerase
27	Pput_2951	3332726..3333202 [-], 477	148548161	putative prophage repressor
28	Pput_2952	3333257..3333985 [+], 729	148548162	hypothetical protein
29	Pput_2953	3334579..3335610 [+], 1032	148548163	hypothetical protein	Tfc23
30	Pput_2954	3335610..3336965 [+], 1356	148548164	hypothetical protein	Tfc22
31	Pput_2955	3336962..3337267 [+], 306	148548165	hypothetical protein
32	Pput_2956	3337277..3338815 [+], 1539	148548166	hypothetical protein	Tfc19
33	Pput_2957	3339648..3340013 [+], 366	148548167	hypothetical protein
34	Pput_2958	3340217..3340633 [+], 417	148548168	hypothetical protein
35	Pput_2959	3340719..3341657 [+], 939	148548169	hypothetical protein
36	Pput_2960	3341744..3342109 [-], 366	148548170	hypothetical protein
37	Pput_2961	3342234..3342437 [-], 204	148548171	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_009512