SecReT4

T4SS
References

T4SS ID	740
Strain	Pseudomonas putida S16
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_015733
Location	2630368..2651382
Name	Tfc
Function	NA
Classification	Type IVC; Type G
This T4SS is identified in this study.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	1	1	1	1	1	0	1	0
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	0

The information of T4SS components from NC_015733

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	PPS_2333	2626757..2626951 [+], 195	339487246	hypothetical protein
2	PPS_2334	2627079..2627444 [+], 366	339487247	putative transcriptional regulator
3	PPS_2335	2627531..2628469 [-], 939	339487248	hypothetical protein
4	PPS_2336	2629181..2629585 [-], 405	339487249	hypothetical protein
5	PPS_2337	2630368..2631906 [-], 1539	339487250	hypothetical protein	Tfc19
6	PPS_2338	2631916..2632164 [-], 249	339487251	hypothetical protein
7	PPS_2339	2632218..2633537 [-], 1320	339487252	hypothetical protein	Tfc22
8	PPS_2340	2633573..2634334 [-], 762	339487253	hypothetical protein	Tfc23
9	PPS_2341	2634767..2637508 [-], 2742	339487254	type IV secretory pathway VirB4 components-like protein	Tfc16
10	PPS_2342	2637508..2637927 [-], 420	339487255	hypothetical protein	Tfc15
11	PPS_2343	2637890..2639398 [-], 1509	339487256	hypothetical protein	Tfc14
12	PPS_2344	2639388..2640194 [-], 807	339487257	hypothetical protein	Tfc13
13	PPS_2345	2640194..2640874 [-], 681	339487258	hypothetical protein	Tfc12
14	PPS_2346	2640829..2641128 [-], 300	339487259	hypothetical protein	Tfc11
15	PPS_2347	2641238..2641495 [-], 258	339487260	hypothetical protein
16	PPS_2348	2641631..2641870 [-], 240	339487261	hypothetical protein
17	PPS_2349	2642484..2643386 [-], 903	339487262	putative AraC family transcriptional regulator
18	PPS_2350	2643516..2644259 [+], 744	339487263	short-chain dehydrogenase/reductase SDR
19	PPS_2351	2644277..2644678 [+], 402	339487264	glyoxalase
20	PPS_2352	2644660..2645652 [+], 993	339487265	hypothetical protein
21	PPS_2353	2645713..2646441 [-], 729	339487266	hypothetical protein	Tfc8
22	PPS_2354	2646477..2648603 [-], 2127	339487267	hypothetical protein	Tfc6
23	PPS_2355	2648613..2648987 [-], 375	339487268	hypothetical protein	Tfc5
24	PPS_2356	2649071..2649538 [-], 468	339487269	lytic transglycosylase	Tfc4
25	PPS_2357	2649607..2650323 [-], 717	339487270	hypothetical protein	Tfc3
26	PPS_2358	2650334..2651002 [-], 669	339487271	hypothetical protein
27	PPS_2359	2650999..2651382 [-], 384	339487272	type IV B pilus protein	Tfc2
28	PPS_2360	2651648..2652364 [-], 717	339487273	hypothetical protein
29	PPS_2361	2652424..2652918 [-], 495	339487274	DNA repair protein RadC
30	PPS_2362	2652980..2653237 [-], 258	339487275	hypothetical protein
31	PPS_2363	2653298..2653699 [-], 402	339487276	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_015733