SecReT4

T4SS
References

T4SS ID	738
Strain	Alicycliphilus denitrificans K601
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_015422
Location	1874184..1880163; 1895984..1914333
Name	Tfc
Function	NA
Classification	Type IVC; Type G
This T4SS is identified in this study.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	1	1	1	1	1	0	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	1

The information of T4SS components from NC_015422
Region 1: 1874184..1880163

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Alide2_1772	1869543..1869809 [+], 267	330824372	hypothetical protein
2	Alide2_1773	1869806..1870522 [+], 717	330824373	ABC transporter
3	Alide2_1774	1870689..1871975 [+], 1287	330824374	hypothetical protein
4	Alide2_1775	1871972..1872679 [+], 708	330824375	hypothetical protein
5	Alide2_1776	1872692..1873531 [+], 840	330824376	hypothetical protein
6	Alide2_1778	1874184..1874744 [+], 561	330824377	integrating conjugative element protein PilL	Tfc2
7	Alide2_1779	1874741..1875388 [+], 648	330824378	hypothetical protein
8	Alide2_1780	1875398..1876117 [+], 720	330824379	integrating conjugative element protein	Tfc3
9	Alide2_1781	1876102..1876722 [+], 621	330824380	lytic transglycosylase catalytic subunit	Tfc4
10	Alide2_1782	1876719..1877252 [+], 534	330824381	integrating conjugative element protein	Tfc5
11	Alide2_1783	1877261..1879417 [+], 2157	330824382	conjugative coupling factor TraD	Tfc6
12	Alide2_1784	1879414..1880163 [+], 750	330824383	integrating conjugative element membrane protein	Tfc8
13	Alide2_1785	1880209..1882836 [-], 2628	330824384	hypothetical protein

Region 2: 1895984..1914333

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Alide2_1790	1891555..1892541 [-], 987	330824389	AAA ATPase
2	Alide2_1791	1892622..1895501 [-], 2880	330824390	SNF2-like protein
3	Alide2_1792	1895560..1895760 [-], 201	330824391	excisionase family DNA binding domain-containing protein
4	Alide2_1793	1895984..1896349 [+], 366	330824392	hypothetical protein	Tfc9
5	Alide2_1794	1896346..1896585 [+], 240	330824393	integrating conjugative element protein
6	Alide2_1795	1896608..1896976 [+], 369	330824394	integrating conjugative element membrane protein
7	Alide2_1796	1896989..1897399 [+], 411	330824395	conjugative transfer region protein	Tfc11
8	Alide2_1797	1897396..1898088 [+], 693	330824396	integrating conjugative element protein	Tfc12
9	Alide2_1798	1898085..1898999 [+], 915	330824397	integrating conjugative element protein	Tfc13
10	Alide2_1799	1898989..1900422 [+], 1434	330824398	integrating conjugative element protein	Tfc14
11	Alide2_1800	1900403..1900837 [+], 435	330824399	conjugative transfer region lipoprotein	Tfc15
12	Alide2_1801	1900837..1903725 [+], 2889	330824400	conjugative transfer ATPase	Tfc16
13	Alide2_1802	1903739..1904482 [+], 744	330824401	hypothetical protein
14	Alide2_1803	1904678..1905172 [+], 495	330824402	DNA repair protein RadC
15	Alide2_1804	1905395..1905871 [+], 477	330824403	hypothetical protein
16	Alide2_1805	1905868..1908831 [+], 2964	330824404	N-6 DNA methylase
17	Alide2_1806	1908981..1909499 [+], 519	330824405	hypothetical protein
18	Alide2_1807	1909643..1910086 [+], 444	330824406	integrating conjugative element protein	Tfc24
19	Alide2_1808	1910083..1911027 [+], 945	330824407	integrating conjugative element protein	Tfc23
20	Alide2_1809	1911038..1912444 [+], 1407	330824408	integrating conjugative element protein	Tfc22
21	Alide2_1810	1912441..1912794 [+], 354	330824409	hypothetical protein
22	Alide2_1811	1912810..1914333 [+], 1524	330824410	hypothetical protein	Tfc19
23	Alide2_1812	1914350..1914718 [-], 369	330824411	hypothetical protein
24	Alide2_1813	1914948..1915706 [+], 759	330824412	hypothetical protein
25	Alide2_1814	1915699..1916619 [+], 921	330824413	hypothetical protein
26	Alide2_1815	1916822..1918666 [+], 1845	330824414	integrating conjugative element relaxase
27	Alide2_1816	1918693..1918992 [-], 300	330824415	helix-turn-helix domain-containing protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_015422