SecReT4

T4SS
References

T4SS ID	730
Strain	Acidovorax sp. JS42
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_008782
Location	2307140..2321187; 2341585..2347692
Name	Tfc
Function	NA
Classification	Type IVC; Type G
This T4SS is identified in this study.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	1	1	1	1	1	0	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	1

The information of T4SS components from NC_008782
Region 1: 2307140..2321187

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Ajs_2174	2302481..2302780 [+], 300	121594519	XRE family transcriptional regulator
2	Ajs_2175	2302807..2304651 [-], 1845	121594520	relaxase
3	Ajs_2176	2304854..2305774 [-], 921	121594521	hypothetical protein
4	Ajs_2177	2305767..2306594 [-], 828	121594522	hypothetical protein
5	Ajs_2178	2306755..2307123 [+], 369	121594523	hypothetical protein
6	Ajs_2179	2307140..2308663 [-], 1524	121594524	hypothetical protein	Tfc19
7	Ajs_2180	2308679..2309032 [-], 354	121594525	hypothetical protein
8	Ajs_2181	2309029..2310435 [-], 1407	121594526	hypothetical protein	Tfc22
9	Ajs_2182	2310446..2311390 [-], 945	121594527	hypothetical protein	Tfc23
10	Ajs_2183	2311387..2311836 [-], 450	121594528	hypothetical protein	Tfc24
11	Ajs_2184	2312005..2312499 [-], 495	121594529	DNA repair protein RadC
12	Ajs_2185	2312695..2313438 [-], 744	121594530	hypothetical protein
13	Ajs_2186	2313452..2316340 [-], 2889	121594531	hypothetical protein	Tfc16
14	Ajs_2187	2316340..2316774 [-], 435	121594532	hypothetical protein	Tfc15
15	Ajs_2188	2316755..2318188 [-], 1434	121594533	hypothetical protein	Tfc14
16	Ajs_2189	2318178..2319092 [-], 915	121594534	hypothetical protein	Tfc13
17	Ajs_2190	2319089..2319781 [-], 693	121594535	hypothetical protein	Tfc12
18	Ajs_2191	2319778..2320188 [-], 411	121594536	hypothetical protein	Tfc11
19	Ajs_2192	2320201..2320569 [-], 369	121594537	hypothetical protein
20	Ajs_2193	2320592..2320831 [-], 240	121594538	hypothetical protein
21	Ajs_2194	2320828..2321187 [-], 360	121594539	hypothetical protein	Tfc9
22	Ajs_2195	2321480..2321692 [+], 213	121594540	phage transcriptional regulator AlpA
23	Ajs_2196	2321702..2322802 [+], 1101	121594541	DNA-cytosine methyltransferase
24	Ajs_2197	2322823..2323281 [+], 459	121594542	putative very short patch repair protein

Region 2: 2341585..2347692

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Ajs_2204	2337936..2339795 [+], 1860	121594549	hypothetical protein
2	Ajs_2205	2339797..2340558 [+], 762	121594550	phospholipase D/transphosphatidylase
3	Ajs_2206	2340610..2341302 [-], 693	121594551	hypothetical protein
4	Ajs_2207	2341585..2342334 [-], 750	121594552	hypothetical protein	Tfc8
5	Ajs_2208	2342331..2344487 [-], 2157	121594553	hypothetical protein	Tfc6
6	Ajs_2209	2344496..2345029 [-], 534	121594554	hypothetical protein	Tfc5
7	Ajs_2210	2345026..2345646 [-], 621	121594555	lytic transglycosylase catalytic subunit	Tfc4
8	Ajs_2211	2345631..2346350 [-], 720	121594556	hypothetical protein	Tfc3
9	Ajs_2212	2346437..2347084 [-], 648	121594557	hypothetical protein
10	Ajs_2213	2347081..2347692 [-], 612	121594558	hypothetical protein	Tfc2
11	Ajs_2214	2348050..2348361 [+], 312	121594559	hypothetical protein
12	Ajs_2215	2348354..2349265 [+], 912	121594560	hypothetical protein
13	Ajs_2216	2349262..2349507 [+], 246	121594561	hypothetical protein
14	Ajs_2217	2349504..2351267 [+], 1764	121594562	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_008782