SecReT4

T4SS
References

T4SS ID	717
Strain	Edwardsiella ictaluri 93-146
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_012779
Location	334333..360018
Name	Tfc
Function	NA
Classification	Type IVC; Type G
This T4SS is identified in this study.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	1	1	1	1	1	0	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	1

The information of T4SS components from NC_012779

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	NT01EI_RS01425	329712..331742 [+], 2031	506350055	DNA topoisomerase III
2	NT01EI_RS01430	332392..332856 [+], 465	506350056	DUF3577 domain-containing protein
3	NT01EI_RS17575	332934..333137 [+], 204	506350057	hypothetical protein
4	NT01EI_RS01435	333150..333695 [+], 546	pseudogene	single-stranded DNA-binding protein
5	NT01EI_RS17580	333709..333945 [+], 237	1101975730	DUF4160 domain-containing protein
6	NT01EI_RS17585	333926..334189 [+], 264	506350058	DUF2442 domain-containing protein
7	NT01EI_RS01445	334331..334927 [+], 597	506350059	PilL N-terminal domain-containing protein
8	NT01EI_RS01450	334924..335646 [+], 723	737638805	hypothetical protein
9	NT01EI_RS01455	335653..336357 [+], 705	506350061	TIGR03759 family integrating conjugative element protein
10	NT01EI_RS01460	336336..337001 [+], 666	737638809	transglycosylase SLT domain-containing protein
11	NT01EI_RS01465	337001..337513 [+], 513	506350063	integrating conjugative element protein
12	NT01EI_RS01470	337677..338474 [+], 798	1381893059	hypothetical protein
13	NT01EI_RS01475 (traD)	338471..340561 [+], 2091	737638812	type IV conjugative transfer system coupling protein TraD
14	NT01EI_RS01480	340554..341309 [+], 756	506350066	TIGR03747 family integrating conjugative element membrane protein
15	NT01EI_RS01485	341417..342007 [-], 591	737638815	hypothetical protein
16	NT01EI_RS01490	342113..342454 [+], 342	506350068	RAQPRD family integrative conjugative element protein
17	NT01EI_RS01495	342454..342696 [+], 243	506350069	TIGR03758 family integrating conjugative element protein
18	NT01EI_RS01500	342723..343109 [+], 387	506350070	TIGR03745 family integrating conjugative element membrane protein
19	NT01EI_RS01505	343119..343475 [+], 357	506350071	TIGR03750 family conjugal transfer protein
20	NT01EI_RS01510	343472..344131 [+], 660	506350072	TIGR03746 family integrating conjugative element protein
21	NT01EI_RS01515	344131..345060 [+], 930	506350073	TIGR03749 family integrating conjugative element protein
22	NT01EI_RS01520	345050..346564 [+], 1515	506350074	TIGR03752 family integrating conjugative element protein
23	NT01EI_RS01525	346574..346996 [+], 423	737638818	TIGR03751 family conjugal transfer lipoprotein
24	NT01EI_RS01530	346996..349860 [+], 2865	506350076	conjugative transfer ATPase
25	NT01EI_RS01535	349857..350249 [+], 393	506350077	hypothetical protein
26	NT01EI_RS01540	350357..351568 [+], 1212	506350078	IS256-like element ISEic2 family transposase
27	NT01EI_RS01545	351627..352835 [+], 1209	506350079	IS256-like element ISEic2 family transposase
28	NT01EI_RS01550	353102..355099 [-], 1998	506350080	putative DNA binding domain-containing protein
29	NT01EI_RS01555	355278..355673 [+], 396	506350081	TIGR03757 family integrating conjugative element protein
30	NT01EI_RS01560	355670..356662 [+], 993	506350082	TIGR03756 family integrating conjugative element protein
31	NT01EI_RS01565	356674..358107 [+], 1434	916236409	integrating conjugative element protein
32	NT01EI_RS01570	358121..358474 [+], 354	506350084	hypothetical protein
33	NT01EI_RS01575	358481..360016 [+], 1536	506350085	conjugal transfer protein TraG
34	NT01EI_RS01580	360062..360280 [-], 219	506350086	hypothetical protein
35	NT01EI_RS01585	360439..360996 [+], 558	754090689	hypothetical protein
36	NT01EI_RS01590	361117..361818 [+], 702	1101975719	YkgJ family cysteine cluster protein
37	NT01EI_RS01595	362842..363765 [+], 924	737638604	integrase domain-containing protein
38	NT01EI_RS01600	363786..364208 [+], 423	506350090	hypothetical protein
39	NT01EI_RS19405	364613..364951 [+], 339	1101975720	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_012779