SecReT4

T4SS
References

T4SS ID	711
Strain	Parvibaculum lavamentivorans DS-1
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_009719
Location	3648888..3669087
Name	Tfc
Function	NA
Classification	Type IVC; Type G
This T4SS is identified in this study.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	1	1	1	1	1	0	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	1

The information of T4SS components from NC_009719

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Plav_3406	3644251..3645030 [+], 780	154253842	hypothetical protein
2	Plav_3407	3645099..3646913 [-], 1815	154253843	UvrD/REP helicase
3	Plav_3408	3646900..3648684 [-], 1785	154253844	hypothetical protein
4	Plav_3409	3648888..3649508 [+], 621	154253845	hypothetical protein	Tfc2
5	Plav_3410	3649505..3650155 [+], 651	154253846	hypothetical protein
6	Plav_3411	3650170..3650895 [+], 726	154253847	putative signal peptide	Tfc3
7	Plav_3412	3650877..3651467 [+], 591	154253848	lytic transglycosylase catalytic subunit	Tfc4
8	Plav_3413	3651464..3652012 [+], 549	154253849	hypothetical protein	Tfc5
9	Plav_3414	3652017..3654218 [+], 2202	154253850	hypothetical protein	Tfc6
10	Plav_3415	3654215..3654964 [+], 750	154253851	hypothetical protein	Tfc8
11	Plav_3416	3655063..3655446 [+], 384	154253852	hypothetical protein	Tfc9
12	Plav_3417	3655443..3655676 [+], 234	154253853	hypothetical protein
13	Plav_3418	3655693..3656052 [+], 360	154253854	hypothetical protein
14	Plav_3419	3656064..3656474 [+], 411	154253855	hypothetical protein	Tfc11
15	Plav_3420	3656471..3657160 [+], 690	154253856	hypothetical protein	Tfc12
16	Plav_3421	3657157..3658083 [+], 927	154253857	hypothetical protein	Tfc13
17	Plav_3422	3658073..3659482 [+], 1410	154253858	hypothetical protein	Tfc14
18	Plav_3423	3659463..3659912 [+], 450	154253859	putative signal peptide	Tfc15
19	Plav_3424	3659912..3662782 [+], 2871	154253860	hypothetical protein	Tfc16
20	Plav_3425	3662795..3663559 [+], 765	154253861	hypothetical protein
21	Plav_3426	3663744..3664238 [+], 495	154253862	DNA repair protein RadC
22	Plav_3427	3664398..3664844 [+], 447	154253863	hypothetical protein	Tfc24
23	Plav_3428	3664841..3665788 [+], 948	154253864	hypothetical protein	Tfc23
24	Plav_3429	3665798..3667192 [+], 1395	154253865	hypothetical protein	Tfc22
25	Plav_3430	3667189..3667548 [+], 360	154253866	hypothetical protein
26	Plav_3431	3667564..3669087 [+], 1524	154253867	hypothetical protein	Tfc19
27	Plav_3432	3669094..3669453 [-], 360	154253868	hypothetical protein
28	Plav_3433	3669481..3669939 [-], 459	154253869	hypothetical protein
29	Plav_3434	3669939..3670325 [-], 387	154253870	AbrB family transcriptional regulator
30	Plav_3435	3670558..3672423 [+], 1866	154253871	relaxase
31	Plav_3436	3672693..3673070 [-], 378	154253872	hypothetical protein
32	Plav_3437	3673265..3674044 [-], 780	154253873	IstB ATP-binding domain-containing protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_009719