T4SS ID	707
Strain	Pseudomonas aeruginosa UCBPP-PA14
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_008463
Location	5308021..5345975
Name	Tfc
Function	conjugation
Classification	Type IVC; Type G
Experimental investigation has been performed on this T4SS.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	0	1	1	1	1	0	2	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	1

The information of T4SS components from NC_008463
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	PA14_RS30940	5303485..5303844 [+], 360	489233152	DUF4440 domain-containing protein
2	PA14_RS30945	5304020..5304180 [+], 161	pseudogene	Hin recombinase
3	PA14_RS24300	5304246..5304920 [-], 675	489233156	hypothetical protein
4	PA14_RS24305	5305003..5305668 [-], 666	489233158	DUF3218 family protein
5	PA14_RS30950	5305679..5306710 [-], 1032	489233160	hypothetical protein
6	PA14_RS24315	5307321..5308010 [+], 690	489233161	hypothetical protein
7	PA14_RS24320	5308021..5308776 [+], 756	489233163	TIGR03759 family integrating conjugative element protein	Tfc3
8	PA14_RS24325	5308761..5309342 [+], 582	489233166	hypothetical protein	Tfc4
9	PA14_RS24330	5309339..5309839 [+], 501	489233167	integrating conjugative element protein	Tfc5
10	PA14_RS24335	5309848..5310105 [+], 258	489233169	hypothetical protein
11	PA14_RS24340 (traD)	5310109..5312343 [+], 2235	489233173	type IV conjugative transfer system coupling protein TraD	Tfc6
12	PA14_RS24345	5312343..5313089 [+], 747	489233175	TIGR03747 family integrating conjugative element membrane protein	Tfc8
13	PA14_RS24350	5313097..5313362 [+], 266	pseudogene	IS3 family transposase
14	PA14_RS24355	5313527..5314075 [+], 549	489233177	type 1 fimbrial protein
15	PA14_RS24360	5314164..5314910 [+], 747	489233179	molecular chaperone
16	PA14_RS24365	5314894..5317507 [+], 2614	pseudogene	fimbrial biogenesis outer membrane usher protein
17	PA14_RS24370	5317504..5318850 [+], 1347	489233181	fimbrial protein
18	PA14_RS24375	5318840..5319556 [+], 717	489233184	molecular chaperone
19	PA14_RS24380	5319600..5320295 [-], 696	489233186	response regulator
20	PA14_RS24385	5320295..5323549 [-], 3255	489233188	hybrid sensor histidine kinase/response regulator
21	PA14_RS24390	5323630..5324829 [-], 1200	489233191	EAL domain-containing response regulator
22	PA14_RS24395	5324826..5327621 [-], 2796	489233193	response regulator
23	PA14_RS24400	5327953..5328603 [+], 651	499986040	TIGR03747 family integrating conjugative element membrane protein	Tfc8
24	PA14_RS24405	5328614..5330095 [+], 1482	489233195	UvrD-helicase domain-containing protein
25	PA14_RS31475	5330226..5331335 [+], 1110	489233197	hypothetical protein
26	PA14_RS30955	5331379..5331690 [-], 312	489225784	DUF2845 domain-containing protein
27	PA14_RS24415	5331863..5332168 [+], 306	489233199	hypothetical protein
28	PA14_RS24420	5332262..5332600 [+], 339	685891474	RAQPRD family integrative conjugative element protein
29	PA14_RS24425	5332597..5332836 [+], 240	489216755	TIGR03758 family integrating conjugative element protein
30	PA14_RS24430	5332854..5333210 [+], 357	489233202	TIGR03745 family integrating conjugative element membrane protein
31	PA14_RS24435	5333221..5333607 [+], 387	489233203	TIGR03750 family conjugal transfer protein	Tfc11
32	PA14_RS24440	5333604..5334263 [+], 660	489176642	TIGR03746 family integrating conjugative element protein	Tfc12
33	PA14_RS24445	5334260..5335144 [+], 885	489233204	TIGR03749 family integrating conjugative element protein	Tfc13
34	PA14_RS24450	5335128..5336633 [+], 1506	489233205	TIGR03752 family integrating conjugative element protein	Tfc14
35	PA14_RS24455	5336611..5337054 [+], 444	489233206	TIGR03751 family conjugal transfer lipoprotein	Tfc15
36	PA14_RS24460	5337054..5339996 [+], 2943	499986041	conjugative transfer ATPase	Tfc16
37	PA14_RS24465	5339993..5340277 [+], 285	489176637	hypothetical protein
38	PA14_RS24470	5340274..5340933 [+], 660	499986042	DsbA family protein
39	PA14_RS24475	5340930..5341148 [-], 219	499986043	hypothetical protein
40	PA14_RS24480	5341357..5341788 [+], 432	489233213	TIGR03757 family integrating conjugative element protein	Tfc24
41	PA14_RS24485	5341788..5342726 [+], 939	489233214	TIGR03756 family integrating conjugative element protein	Tfc23
42	PA14_RS24490	5342744..5344126 [+], 1383	489233215	integrating conjugative element protein	Tfc22
43	PA14_RS24495	5344126..5344467 [+], 342	489233216	hypothetical protein
44	PA14_RS24500	5344464..5345975 [+], 1512	489233217	conjugal transfer protein TraG	Tfc19
45	PA14_RS30960	5346001..5346345 [-], 345	489233218	hypothetical protein
46	PA14_RS24505	5346464..5346736 [+], 273	489176626	type II toxin-antitoxin system ParD family antitoxin
47	PA14_RS24510	5346740..5347090 [+], 351	489233219	type II toxin-antitoxin system RelE/ParE family toxin
48	PA14_RS31480	5347604..5347768 [-], 165	510933864	hypothetical protein
49	PA14_RS24515	5348012..5350435 [+], 2424	489233222	ATP-dependent endonuclease

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) PAPI-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Juhas M; Crook DW; Hood DW (2008). Type IV secretion systems: tools of bacterial horizontal gene transfer and virulence. Cell Microbiol. 10(12):2377-86. [PudMed:18549454]