SecReT4

T4SS
References

T4SS ID	693
Strain	Pectobacterium wasabiae WPP163
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_013421
Location	681380..703830; 718870..723604
Name	Tfc
Function	NA
Classification	Type IVC; Type G
This T4SS is identified in this study.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	0	1	1	1	1	0	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	1

The information of T4SS components from NC_013421
Region 1: 681380..703830

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Pecwa_0635	676679..677101 [+], 423	261819960	hypothetical protein
2	Pecwa_0636	677588..678022 [-], 435	261819961	hypothetical protein
3	Pecwa_0637	678324..678746 [-], 423	261819962	hypothetical protein
4	Pecwa_0638	678818..679291 [-], 474	261819963	hypothetical protein
5	Pecwa_0639	679339..680463 [+], 1125	261819964	integrase
6	Pecwa_0640	680568..681371 [+], 804	261819965	hypothetical protein
7	Pecwa_0641	681380..682087 [+], 708	261819966	hypothetical protein	Tfc3
8	Pecwa_0642	682066..682716 [+], 651	261819967	lytic transglycosylase	Tfc4
9	Pecwa_0643	682713..683264 [+], 552	261819968	hypothetical protein	Tfc5
10	Pecwa_0644	683279..683815 [+], 537	261819969	hypothetical protein
11	Pecwa_0645	683808..685919 [+], 2112	261819970	TraG-family protein	Tfc6
12	Pecwa_0646	685919..686671 [+], 753	261819971	inner membrane protein	Tfc8
13	Pecwa_0647	687024..687542 [+], 519	261819972	type VI secretion system effector
14	Pecwa_0648	687663..689492 [+], 1830	261819973	ImpA family type VI secretion-associated protein
15	Pecwa_0649	689521..689964 [+], 444	261819974	hypothetical protein
16	Pecwa_0650	689957..694225 [+], 4269	261819975	hypothetical protein
17	Pecwa_0651	694222..694779 [+], 558	261819976	hypothetical protein
18	Pecwa_0652	694946..695254 [+], 309	261819977	hypothetical protein	Tfc9
19	Pecwa_0653	695251..695487 [+], 237	261819978	hypothetical protein
20	Pecwa_0654	695516..695875 [+], 360	261819979	hypothetical protein
21	Pecwa_0655	695887..696261 [+], 375	261819980	hypothetical protein	Tfc11
22	Pecwa_0656	696258..696917 [+], 660	261819981	hypothetical protein	Tfc12
23	Pecwa_0657	696914..697810 [+], 897	261819982	hypothetical protein	Tfc13
24	Pecwa_0658	697807..699348 [+], 1542	261819983	hypothetical protein	Tfc14
25	Pecwa_0659	699351..700154 [+], 804	261819984	hypothetical protein
26	Pecwa_0660	700141..700602 [+], 462	261819985	hypothetical protein
27	Pecwa_0661	700595..701005 [+], 411	261819986	hypothetical protein	Tfc15
28	Pecwa_0662	701005..703830 [+], 2826	261819987	hypothetical protein	Tfc16
29	Pecwa_0663	703827..704225 [+], 399	261819988	hypothetical protein
30	Pecwa_0664	704395..705297 [+], 903	261819989	hypothetical protein
31	Pecwa_0665	705294..705521 [-], 228	261819990	hypothetical protein
32	Pecwa_0666	705711..708098 [+], 2388	261819991	hypothetical protein
33	Pecwa_0667	708322..708594 [+], 273	261819992	Insertion element protein

Region 2: 718870..723604

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Pecwa_0674	714261..714812 [+], 552	261819998	hypothetical protein
2	Pecwa_0676	715768..718461 [+], 2694	261819999	DNA repair ATPase
3	Pecwa_0678	718870..719274 [+], 405	261820000	hypothetical protein	Tfc24
4	Pecwa_0679	719271..720239 [+], 969	261820001	hypothetical protein	Tfc23
5	Pecwa_0680	720255..721682 [+], 1428	261820002	hypothetical protein	Tfc22
6	Pecwa_0681	721685..722029 [+], 345	261820003	hypothetical protein
7	Pecwa_0682	722039..723604 [+], 1566	261820004	hypothetical protein	Tfc19
8	Pecwa_0683	723640..723909 [-], 270	261820005	hypothetical protein
9	Pecwa_0684	724014..724736 [+], 723	261820006	hypothetical protein
10	Pecwa_0685	724883..725731 [-], 849	261820007	hypothetical protein
11	Pecwa_0686	726654..727541 [+], 888	261820008	hypothetical protein
12	Pecwa_0687	727575..727769 [+], 195	261820009	hypothetical protein
13	Pecwa_0688	728108..728455 [+], 348	261820010	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_013421