SecReT4

T4SS
References

T4SS ID	673
Strain	Clostridium difficile R20291
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_013316
Location	4105406..4117793
Name	Tra_Tn
Function	NA
Classification	Type IVD; Type GP
This T4SS is identified in this study.

T4SS components

Component	Orf13_Tn	Orf14_Tn	Orf15_Tn	Orf16_Tn	Orf17_Tn	Orf19_Tn	Orf21_Tn
Number	1	1	1	1	0	1	1

The information of T4SS components from NC_013316

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	CDR20291_3454	4102371..4102694 [+], 324	260688795	conjugative transposon protein
2	CDR20291_3455	4103708..4104166 [+], 459	260688796	hypothetical protein
3	CDR20291_3456	4104191..4104733 [+], 543	260688797	hypothetical protein
4	CDR20291_3457	4104769..4105296 [+], 528	260688798	hypothetical protein
5	CDR20291_3458	4105406..4106800 [+], 1395	260688799	conjugative transposon FtsK_SpoIIIE-related protein	Orf21_Tn
6	CDR20291_3459	4107080..4108201 [+], 1122	260688800	conjugative transposon replication initiation factor
7	CDR20291_3460	4108343..4108564 [+], 222	260688801	conjugative transposon protein	Orf19_Tn
8	CDR20291_3461	4108878..4109522 [+], 645	260688802	chloramphenicol o-acetyltransferase
9	CDR20291_3462	4109808..4110305 [+], 498	260688803	conjugative transposon protein
10	CDR20291_3463	4110321..4110824 [+], 504	260688804	conjugative transposon protein
11	CDR20291_3464	4111313..4113745 [+], 2433	260688805	conjugative transposon protein	Orf16_Tn
12	CDR20291_3465	4113745..4115880 [+], 2136	260688806	conjugative transposon protein	Orf15_Tn
13	CDR20291_3466	4115877..4116884 [+], 1008	260688807	cell wall hydrolase	Orf14_Tn
14	CDR20291_3467	4116900..4117793 [+], 894	260688808	conjugative transposon protein	Orf13_Tn
15	CDR20291_3468	4118006..4118863 [+], 858	260688809	hypothetical protein
16	CDR20291_3469	4118935..4119522 [+], 588	260688810	transcriptional regulator
17	CDR20291_3470	4119551..4120471 [+], 921	260688811	ABC transporter ATP-binding protein
18	CDR20291_3471	4120468..4121151 [+], 684	260688812	ABC transporter permease
19	CDR20291_3472	4121148..4121846 [+], 699	260688813	ABC transporter permease
20	CDR20291_3473	4121858..4122769 [+], 912	260688814	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_013316