T4SS ID	667
Strain	Clostridium difficile 630
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_009089
Location	440599..452591
Name	Tra_Tn
Function	conjugation
Classification	Type IVD; Type GP
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	Orf13_Tn	Orf14_Tn	Orf15_Tn	Orf16_Tn	Orf17_Tn	Orf19_Tn	Orf21_Tn
Number	1	1	1	1	1	1	1

The information of T4SS components from NC_009089
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	CD630_03640	435772..436542 [-], 771	126697934	ABC transporter ATP-binding protein Tn916-like, CTn1-Orf9
2	CD630_03650	436715..437446 [-], 732	126697935	ABC transporter multidrug-family permease Tn916-like, CTn1-Orf10
3	CD630_03660	437439..438365 [-], 927	126697936	ABC transporter multidrug-family ATP-binding protein Tn916-like, CTn1-Orf11
4	CD630_03670	438435..439343 [-], 909	126697937	two-component sensor histidine kinase,Tn916-like,CTn1-Orf12
5	CD630_03680	439346..440038 [-], 693	126697938	two-component response regulator,Tn916-like,CTn1-Orf13
6	CD630_03690	440069..440293 [-], 225	400927257	conjugative transposon protein
7	CD630_03700	440311..440511 [-], 201	126697940	HTH-type transcriptional regulator
8	CD630_03710	440599..441510 [-], 912	126697941	conjugative transposon protein	Orf13_Tn
9	CD630_03720	441526..442533 [-], 1008	126697942	cell wall hydrolase	Orf14_Tn
10	CD630_03730	442530..444737 [-], 2208	400927258	membrane protein
11	CD630_03740	444737..447187 [-], 2451	126697944	ATPase	Orf16_Tn
12	CD630_03750	447165..447563 [-], 399	126697945	conjugative transposon protein	Orf17_Tn
13	CD630_03760	447677..448180 [-], 504	126697946	antirestriction protein
14	CD630_03770	448198..448701 [-], 504	126697947	antirestriction protein
15	CD630_03780	448620..448916 [-], 297	400927259	conjugative transposon protein
16	CD630_03790	448992..449213 [-], 222	126697948	conjugative transposon protein	Orf19_Tn
17	CD630_03800	449214..449348 [-], 135	400927260	conjugative transposon protein
18	CD630_03810	449360..450472 [-], 1113	126697950	replication initiation factor
19	CD630_03820	450811..451209 [-], 399	400927261	conjugative transposon protein
20	CD630_03830	451221..452591 [-], 1371	126697952	cell-division FtsK/SpoIIIE-family protein8	Orf21_Tn
21	CD630_03840	452608..452997 [-], 390	126697953	conjugative transposon protein
22	CD630_03850	453006..453332 [-], 327	126697954	conjugative transposon protein
23	CD630_03851	453368..453553 [-], 186	126697955	hypothetical protein
24	CD630_03860	453566..456610 [-], 3045	126697956	cell surface protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) CTn1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Sebaihia M; Wren BW; Mullany P; Fairweather NF; Minton N; Stabler R; Thomson NR; Roberts AP; Cerdeno-Tarraga AM; Wang H; Holden MT; Wright A; Churcher C; Quail MA; Baker S; Bason N; Brooks K; Chillingworth T; Cronin A; Davis P; Dowd L; Fraser A; Feltwell T; Hance Z; Holroyd S; Jagels K; Moule S; Mungall K; Price C; Rabbinowitsch E; Sharp S; Simmonds M; Stevens K; Unwin L; Whithead S; Dupuy B; Dougan G; Barrell B; Parkhill J (2006). The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome. Nat Genet. 38(7):779-86. [PudMed:16804543]