T4SS ID	665
Strain	Streptococcus suis BM407
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_012926
Location	541683..552348
Name	Tra_Tn
Function	conjugation
Classification	Type IVD; Type GP
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	Orf13_Tn	Orf14_Tn	Orf15_Tn	Orf16_Tn	Orf17_Tn	Orf19_Tn	Orf21_Tn
Number	1	1	1	1	1	1	1

The information of T4SS components from NC_012926
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SSUBM407_0479a	536870..537073 [-], 204	253755102	excisionase
2	SSUBM407_0480	537534..537764 [-], 231	253755103	hypothetical protein
3	SSUBM407_0481	537761..538183 [-], 423	253755104	DNA-binding protein
4	SSUBM407_0482	538688..539041 [+], 354	253755105	DNA-binding protein
5	SSUBM407_0483 (tetM1)	539387..541306 [-], 1920	253755106	tetracycline resistance protein TetM 1
6	SSUBM407_0484	541683..542615 [-], 933	253755107	hypothetical protein	Orf13_Tn
7	SSUBM407_0485	542612..543613 [-], 1002	253755108	hypothetical protein	Orf14_Tn
8	SSUBM407_0486	543610..545787 [-], 2178	253755109	hypothetical protein	Orf15_Tn
9	SSUBM407_0487	545790..548237 [-], 2448	253755110	hypothetical protein	Orf16_Tn
10	SSUBM407_0488	548221..548727 [-], 507	253755111	hypothetical protein	Orf17_Tn
11	SSUBM407_0489	548702..549199 [-], 498	253755112	antirestriction protein
12	SSUBM407_0490	549316..549537 [-], 222	253755113	hypothetical protein	Orf19_Tn
13	SSUBM407_0491	549580..550785 [-], 1206	253755114	replication initiation factor
14	SSUBM407_0492	550963..552348 [-], 1386	253755115	FtsK/SpoIIIE family protein	Orf21_Tn
15	SSUBM407_0493	552377..552763 [-], 387	253755116	hypothetical protein
16	SSUBM407_0494	552779..553093 [-], 315	253755117	hypothetical protein
17	SSUBM407_0495	553409..554452 [-], 1044	253755118	hypothetical protein
18	SSUBM407_0496	554587..555225 [+], 639	253755119	hypothetical protein
19	SSUBM407_0497	555264..556340 [+], 1077	253755120	DNA primase
20	SSUBM407_0498	556394..556621 [+], 228	253755121	hypothetical protein
21	SSUBM407_0499	556618..557007 [+], 390	253755122	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICESsu(BM407)1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Holden MT; Hauser H; Sanders M; Ngo TH; Cherevach I; Cronin A; Goodhead I; Mungall K; Quail MA; Price C; Rabbinowitsch E; Sharp S; Croucher NJ; Chieu TB; Mai NT; Diep TS; Chinh NT; Kehoe M; Leigh JA; Ward PN; Dowson CG; Whatmore AM; Chanter N; Iversen P; Gottschalk M; Slater JD; Smith HE; Spratt BG; Xu J; Ye C; Bentley S; Barrell BG; Schultsz C; Maskell DJ; Parkhill J (2009). Rapid evolution of virulence and drug resistance in the emerging zoonotic pathogen Streptococcus suis. PLoS One. 4(7):e6072. [PudMed:19603075]