T4SS ID	658
Strain	Streptococcus pneumoniae Hungary19A-6
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_010380
Location	1308321..1321838
Name	Tra_Tn
Function	conjugation
Classification	Type IVD; Type GP
Bioinformatics investigation has been performed on this T4SS.

T4SS components

Component	Orf13_Tn	Orf14_Tn	Orf15_Tn	Orf16_Tn	Orf17_Tn	Orf19_Tn	Orf21_Tn
Number	1	1	1	1	1	1	1

The information of T4SS components from NC_010380
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SPH_1403	1303508..1303711 [-], 204	169834305	hypothetical protein
2	SPH_1404	1303695..1303946 [+], 252	169832644	hypothetical protein
3	SPH_1405	1304172..1304402 [-], 231	169833294	hypothetical protein
4	SPH_1406	1304399..1304821 [-], 423	169832527	RNA polymerase sigma-70 region 4 family protein
5	SPH_1407	1305050..1305196 [-], 147	169833600	hypothetical protein
6	SPH_1408	1305326..1305679 [+], 354	169834110	transcriptional regulator
7	SPH_1409	1306025..1307944 [-], 1920	169834491	tetracycline resistance protein
8	SPH_1410	1307960..1308076 [-], 117	169834207	tetracycline resistance determinant leader peptide
9	SPH_1411	1308321..1309238 [-], 918	169833889	conjugative transposon protein	Orf13_Tn
10	SPH_1412	1309253..1310254 [-], 1002	169833250	NLP/P60 family protein	Orf14_Tn
11	SPH_1413	1310251..1312428 [-], 2178	169832673	conjugative transposon membrane protein	Orf15_Tn
12	SPH_1414	1312431..1314878 [-], 2448	169834234	conjugative transposon protein	Orf16_Tn
13	SPH_1415	1314862..1315368 [-], 507	169833648	conjugative transposon membrane protein	Orf17_Tn
14	SPH_1416	1315343..1315840 [-], 498	169834223	conjugative transposon protein
15	SPH_1417	1315957..1316178 [-], 222	169833034	hypothetical protein	Orf19_Tn
16	SPH_1418	1316358..1317605 [+], 1248	169834467	transposase
17	SPH_1419	1317726..1317917 [-], 192	169833015	hypothetical protein
18	SPH_1420	1317862..1318599 [-], 738	169833871	rRNA adenine N-6-methyltransferase (macrolide-lincosamide-streptogramin B resistance protein)
19	SPH_1422	1319046..1320275 [-], 1230	169833987	Cro/CI family transcriptional regulator
20	SPH_1423	1320453..1321838 [-], 1386	169833242	DNA translocase FtsK	Orf21_Tn
21	SPH_1424	1321867..1322250 [-], 384	169832738	conjugative transposon protein
22	SPH_1425	1322269..1322583 [-], 315	169834020	conjugative transposon protein
23	SPH_1426	1322606..1322725 [-], 120	169833660	hypothetical protein
24	SPH_1427 (uraA)	1323215..1324498 [+], 1284	169833712	uracil permease
25	SPH_1428 (ffh)	1324594..1326165 [-], 1572	169832782	signal recognition particle protein
26	SPH_1429	1326177..1326509 [-], 333	169834531	DNA-binding protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICESpnH19A6-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]

This literature contains bioinformatics investigation