T4SS ID	654
Strain	Streptococcus agalactiae 2603V/R
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_004116
Location	929751..940415
Name	Tra_Tn
Function	conjugation
Classification	Type IVD; Type GP
Bioinformatics investigation has been performed on this T4SS.

T4SS components

Component	Orf13_Tn	Orf14_Tn	Orf15_Tn	Orf16_Tn	Orf17_Tn	Orf19_Tn	Orf21_Tn
Number	1	1	1	0	1	1	1

The information of T4SS components from NC_004116
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SAG0916	924938..925141 [-], 204	22537079	Tn916, excisionase
2	SAG0917	925125..925376 [+], 252	22537080	Tn916 hypothetical protein
3	SAG0918	925602..925832 [-], 231	22537081	Tn916 hypothetical protein
4	SAG0919	925829..926302 [-], 474	22537082	Tn916 hypothetical protein
5	SAG0920	926480..926551 [-], 72	22537083	Tn916 hypothetical protein
6	SAG0921	926756..927109 [+], 354	22537084	Tn916, transcriptional regulator
7	SAG0922	927169..927354 [-], 186	22537085	Tn916 hypothetical protein
8	SAG0923 (tetM)	927455..929374 [-], 1920	22537086	tetracycline resistance protein
9	SAG0924	929390..929476 [-], 87	22537087	tetracycline resistance determinant leader peptide
10	SAG0925	929751..930683 [-], 933	22537088	Tn916 hypothetical protein	Orf13_Tn
11	SAG0926	930680..931681 [-], 1002	22537089	Tn916, NLP/P60 family protein	Orf14_Tn
12	SAG0927	931678..933855 [-], 2178	22537090	hypothetical protein	Orf15_Tn
13	SAG0929	936288..936794 [-], 507	22537091	Tn916 hypothetical protein	Orf17_Tn
14	SAG0930	936769..937266 [-], 498	22537092	Tn916 hypothetical protein
15	SAG0931	937383..937604 [-], 222	22537093	Tn916 hypothetical protein	Orf19_Tn
16	SAG0932	937647..938852 [-], 1206	22537094	Tn916, transcriptional regulator
17	SAG0933	939030..940415 [-], 1386	22537095	DNA translocase FtsK	Orf21_Tn
18	SAG0934	940444..940830 [-], 387	22537096	Tn916 hypothetical protein
19	SAG0935	940846..941160 [-], 315	22537097	Tn916 hypothetical protein
20	SAG0936	941183..941302 [-], 120	22537098	Tn916 hypothetical protein
21	SAG0938	943034..943402 [-], 369	22537099	GntR family transcriptional regulator

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICESag2603VR-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]

This literature contains bioinformatics investigation