T4SS ID	653
Strain	Listeria monocytogenes EGD-e
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_003210
Location	1137997..1149003
Name	Tra_Tn
Function	conjugation
Classification	Type IVD; Type GP
Bioinformatics investigation has been performed on this T4SS.

T4SS components

Component	Orf13_Tn	Orf14_Tn	Orf15_Tn	Orf16_Tn	Orf17_Tn	Orf19_Tn	Orf21_Tn
Number	1	1	1	1	1	1	1

The information of T4SS components from NC_003210
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	lmo1098	1133466..1133696 [-], 231	16803138	hypothetical protein
2	lmo1099	1133698..1134117 [-], 420	16803139	hypothetical protein
3	lmo1100 (cadA)	1134472..1136595 [-], 2124	16803140	cadmium resistance protein
4	lmo1101	1136900..1137400 [+], 501	16803141	hypothetical protein
5	lmo1102	1137533..1137868 [-], 336	16803142	hypothetical protein
6	lmo1103	1137997..1138914 [-], 918	16803143	hypothetical protein	Orf13_Tn
7	lmo1104	1138930..1139940 [-], 1011	16803144	hypothetical protein	Orf14_Tn
8	lmo1105	1139940..1142099 [-], 2160	16803145	hypothetical protein	Orf15_Tn
9	lmo1106	1142099..1144549 [-], 2451	16803146	hypothetical protein	Orf16_Tn
10	lmo1107	1144533..1144928 [-], 396	16803147	hypothetical protein	Orf17_Tn
11	lmo1108	1145211..1145711 [-], 501	16803148	hypothetical protein
12	lmo1109	1145723..1145944 [-], 222	16803149	hypothetical protein	Orf19_Tn
13	lmo1110	1145941..1146231 [-], 291	16803150	hypothetical protein
14	lmo1111	1146228..1147412 [-], 1185	16803151	hypothetical protein
15	lmo1112	1147603..1149003 [-], 1401	16803152	hypothetical protein	Orf21_Tn
16	lmo1113	1149011..1149385 [-], 375	16803153	hypothetical protein
17	lmo1114	1149406..1149720 [-], 315	16803154	hypothetical protein
18	lmo1115	1149887..1152475 [-], 2589	16803155	hypothetical protein
19	lmo1116	1153010..1153783 [+], 774	16803156	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICELm1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]

This literature contains bioinformatics investigation