T4SS ID	649
Strain	Streptococcus pneumoniae TCH8431/19A
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_014251
Location	2006079..2019593
Name	Tra_Tn
Function	conjugation
Classification	Type IVD; Type GP
Bioinformatics investigation has been performed on this T4SS.

T4SS components

Component	Orf13_Tn	Orf14_Tn	Orf15_Tn	Orf16_Tn	Orf17_Tn	Orf19_Tn	Orf21_Tn
Number	1	1	1	1	1	1	1

The information of T4SS components from NC_014251
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	HMPREF0837_12186	2001745..2002263 [-], 519	298503688	GNAT family acetyltransferase
2	HMPREF0837_12187	2002253..2002696 [-], 444	298503689	ATP-binding protein
3	HMPREF0837_12188	2002782..2003402 [-], 621	298503690	lipoprotein
4	HMPREF0837_12189	2003708..2004571 [-], 864	298503691	transcriptional activator
5	HMPREF0837_12190	2004762..2004932 [+], 171	298503692	hypothetical protein
6	HMPREF0837_12191	2005334..2005648 [+], 315	298503693	conjugative transposon protein
7	HMPREF0837_12192	2005664..2006050 [+], 387	298503694	conjugative transposon protein
8	HMPREF0837_12193	2006079..2007464 [+], 1386	298503695	FtsK/SpoIIIE family cell division protein	Orf21_Tn
9	HMPREF0837_12194	2007467..2007619 [+], 153	298503696	hypothetical protein
10	HMPREF0837_12195	2007642..2008904 [+], 1263	298503697	replication initiation protein
11	HMPREF0837_12196	2008894..2009061 [+], 168	298503698	hypothetical protein
12	HMPREF0837_12197 (ermBP)	2009318..2010055 [+], 738	298503699	rRNA (adenine-N(6)-)-methyltransferase
13	HMPREF0837_12198	2010060..2010191 [+], 132	298503700	hypothetical protein
14	HMPREF0837_12199	2010312..2011559 [-], 1248	298503701	transposase
15	HMPREF0837_12200	2011739..2011960 [+], 222	298503702	hypothetical protein	Orf19_Tn
16	HMPREF0837_12201 (ardA)	2012077..2012574 [+], 498	298503703	antirestriction protein ArdA
17	HMPREF0837_12202	2012549..2013055 [+], 507	298503704	conjugative transposon membrane protein	Orf17_Tn
18	HMPREF0837_12203	2013039..2015486 [+], 2448	298503705	conjugative transposon protein	Orf16_Tn
19	HMPREF0837_12204	2015489..2017666 [+], 2178	298503706	conjugative transposon membrane protein	Orf15_Tn
20	HMPREF0837_12205	2017663..2018664 [+], 1002	298503707	NLP/P60 family protein	Orf14_Tn
21	HMPREF0837_12206	2018661..2019593 [+], 933	298503708	conjugative transposon protein	Orf13_Tn
22	HMPREF0837_12207	2019955..2021889 [+], 1935	298503709	tetracycline resistance protein TetM
23	HMPREF0837_12208	2022068..2022256 [+], 189	298503710	hypothetical protein
24	HMPREF0837_12209 (umuC)	2022253..2022498 [+], 246	298503711	SOS responce UmuC protein
25	HMPREF0837_12210	2022495..2022830 [+], 336	298503712	hypothetical protein
26	HMPREF0837_12211	2022843..2023211 [+], 369	298503713	hypothetical protein
27	HMPREF0837_12212	2023198..2023497 [+], 300	298503714	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICESpnTCH8341-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]

This literature contains bioinformatics investigation