T4SS ID	648
Strain	Streptococcus pneumoniae 670-6B
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_014498
Location	1076620..1090136
Name	Tra_Tn
Function	conjugation
Classification	Type IVD; Type GP
Bioinformatics investigation has been performed on this T4SS.

T4SS components

Component	Orf13_Tn	Orf14_Tn	Orf15_Tn	Orf16_Tn	Orf17_Tn	Orf19_Tn	Orf21_Tn
Number	1	1	1	1	1	1	1

The information of T4SS components from NC_014498
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SP670_1152	1071643..1071771 [+], 129	307127284	hypothetical protein
2	SP670_1153	1071807..1072010 [-], 204	307127285	hypothetical protein
3	SP670_1154	1072698..1073120 [-], 423	307127286	sigma-70, region 4 family
4	SP670_1155	1073153..1073269 [+], 117	307127287	hypothetical protein
5	SP670_1156	1073625..1073978 [+], 354	307127288	transcriptional regulator
6	SP670_1157	1074324..1076243 [-], 1920	307127289	TetM protein
7	SP670_1158	1076620..1077537 [-], 918	307127290	conjugative transposon protein	Orf13_Tn
8	SP670_1159	1077552..1078553 [-], 1002	307127291	NLP/P60 family protein	Orf14_Tn
9	SP670_1160	1078550..1080661 [-], 2112	307127292	conjugative transposon membrane protein	Orf15_Tn
10	SP670_1161	1080730..1083177 [-], 2448	307127293	conjugative transposon protein	Orf16_Tn
11	SP670_1162	1083161..1083391 [-], 231	307127294	conjugative transposon membrane protein	Orf17_Tn
12	SP670_1163	1083642..1084139 [-], 498	307127295	conjugative transposon protein
13	SP670_1164	1084256..1084477 [-], 222	307127296	hypothetical protein	Orf19_Tn
14	SP670_1165	1084657..1085904 [+], 1248	307127297	transposase
15	SP670_1166	1086161..1086898 [-], 738	307127298	rRNA adenine N-6-methyltransferase
16	SP670_1167	1087155..1088573 [-], 1419	307127299	Cro/CI family transcriptional regulator
17	SP670_1168	1088751..1090136 [-], 1386	307127300	ftsk/spoiiie family protein	Orf21_Tn
18	SP670_1169	1090165..1090548 [-], 384	307127301	conjugative transposon protein
19	SP670_1170	1090567..1090881 [-], 315	307127302	conjugative transposon protein
20	SP670_1171	1091197..1091703 [-], 507	307127303	Zn-dependent protease of MPP family
21	SP670_1172	1091696..1092817 [-], 1122	307127304	ThiF family protein
22	SP670_1173	1092976..1093089 [-], 114	307127305	hypothetical protein
23	SP670_1174	1093079..1094662 [-], 1584	307127306	ABC-type multidrug/protein/lipid transport system

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICESpn6706B-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]

This literature contains bioinformatics investigation