T4SS ID	646
Strain	Streptococcus oralis Uo5
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_015291
Location	1825801..1836253
Name	Tra_Tn
Function	conjugation
Classification	Type IVD; Type GP
Bioinformatics investigation has been performed on this T4SS.

T4SS components

Component	Orf13_Tn	Orf14_Tn	Orf15_Tn	Orf16_Tn	Orf17_Tn	Orf19_Tn	Orf21_Tn
Number	1	1	1	1	1	1	1

The information of T4SS components from NC_015291
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SOR_1862	1822266..1823096 [-], 831	331267219	glycosyl transferase family 2
2	SOR_1863	1823318..1824484 [+], 1167	331267220	putative cyanate permease
3	SOR_1864	1824711..1824830 [+], 120	331267221	hypothetical protein
4	SOR_1865	1824853..1825167 [+], 315	331267222	hypothetical protein
5	SOR_1866	1825183..1825569 [+], 387	331267223	hypothetical protein
6	SOR_1867	1825598..1825768 [+], 171	331267224	DNA translocase FtsK
7	SOR_1868	1825801..1826970 [+], 1170	331267225	DNA translocase FtsK	Orf21_Tn
8	SOR_1869	1827148..1828353 [+], 1206	331267226	Tn916, transcriptional regulator
9	SOR_1870	1828396..1828617 [+], 222	331267227	hypothetical protein	Orf19_Tn
10	SOR_1871	1828734..1829231 [+], 498	331267228	hypothetical protein
11	SOR_1872	1829320..1829712 [+], 393	331267229	hypothetical protein	Orf17_Tn
12	SOR_1873	1829696..1832143 [+], 2448	331267230	hypothetical protein	Orf16_Tn
13	SOR_1874	1832212..1834323 [+], 2112	331267231	hypothetical protein	Orf15_Tn
14	SOR_1875	1834320..1835321 [+], 1002	331267232	Tn916 protein; NLP/P60 family protein	Orf14_Tn
15	SOR_1876	1835336..1836253 [+], 918	331267233	hypothetical protein	Orf13_Tn
16	SOR_1877 (tetM)	1836631..1838550 [+], 1920	331267234	tetracycline resistance protein
17	SOR_1878	1838896..1838979 [-], 84	331267235	transcriptional regulator
18	SOR_1879	1839449..1839532 [+], 84	331267236	23S rRNA methylase leader peptide
19	SOR_1880 (ermB)	1839657..1840394 [+], 738	331267237	ribosomal RNA adenine N-6-methyltransferaseadenine dimethylase family protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICESorUo5-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]

This literature contains bioinformatics investigation