SecReT4

T4SS
References

T4SS ID	64
Strain	Delftia acidovorans plasmid pUO1 (NC_005088)
Replicon	plasmid pUO1 [Browse all T4SS(s) in this replicon]
Accession	NC_005088
Location	19324..31255; 51403..53849
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	1	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	1	1	1	1	1

The information of T4SS components from NC_005088
Region 1: 19324..31255

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pUO1_10 (trfA)	16930..18150 [-], 1221	34500488	TrfA
2	pUO1_11 (ssb)	18197..18538 [-], 342	34500489	hypothetical protein
3	pUO1_12 (trbA)	18652..19014 [+], 363	34500490	conjugal transfer protein TrbA
4	pUO1_13 (trbB)	19324..20286 [+], 963	34500491	conjugal transfer ATPase TrbB	TrbB
5	pUO1_14 (trbC)	20303..20767 [+], 465	34500492	conjugal transfer protein TrbC	TrbC
6	pUO1_15 (trbD)	20771..21082 [+], 312	34500493	conjugal transfer protein TrbD	TrbD
7	pUO1_16 (trbE)	21079..23637 [+], 2559	34500494	conjugal transfer protein TrbE	TrbE
8	pUO1_17 (trbF)	23634..24416 [+], 783	34500495	conjugal transfer protein TrbF	TrbF
9	pUO1_18 (trbG)	24413..25333 [+], 921	34500496	conjugal transfer protein TrbG	TrbG
10	pUO1_19 (trbH)	25336..25824 [+], 489	34500497	conjugal transfer protein TrbH	TrbH
11	pUO1_20 (trbI)	25829..27250 [+], 1422	34500498	conjugal transfer protein TrbI	TrbI
12	pUO1_21 (trbJ)	27271..28035 [+], 765	34500499	conjugal transfer protein TrbJ	TrbJ
13	pUO1_22 (trbK)	28045..28272 [+], 228	34500500	TrbK	TrbK
14	pUO1_23 (trbL)	28283..30001 [+], 1719	34500501	TrbL	TrbL
15	pUO1_24 (trbM)	30019..30606 [+], 588	34500502	conjugal transfer protein TrbM
16	pUO1_25 (trbN)	30620..31255 [+], 636	34500503	conjugal transfer protein TrbN	TrbN
17	pUO1_26 (trbO)	31284..31550 [+], 267	34500504	TrbO
18	pUO1_27 (trbP)	31550..32509 [+], 960	34500505	TrbP
19	pUO1_28 (tniA)	32382..34064 [+], 1683	34500506	TniA
20	pUO1_29 (tniB)	34067..34975 [+], 909	34500507	TniB
21	pUO1_30 (tniQ)	34972..36189 [+], 1218	34500508	TniQ

Region 2: 51403..53849

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pUO1_46 (traD)	48917..49306 [-], 390	34500524	hypothetical protein
2	pUO1_47 (traE)	49328..51391 [-], 2064	34500525	hypothetical protein
3	pUO1_48 (traF)	51403..51939 [-], 537	34500526	conjugal transfer peptidase TraF	TraF
4	pUO1_49 (traG)	51936..53849 [-], 1914	34500527	conjugal transfer coupling protein TraG	TraG
5	pUO1_50 (traI)	53846..56086 [-], 2241	34500528	conjugal transfer relaxase TraI
6	pUO1_51 (traH)	54148..54540 [-], 393	34500529	hypothetical protein
7	pUO1_52 (traJ)	56121..56495 [-], 375	34500530	conjugal transfer relaxosome component TraJ
8	pUO1_53 (traK)	56869..57267 [+], 399	34500531	hypothetical protein
9	pUO1_54 (traL)	57267..57992 [+], 726	34500532	conjugal transfer protein TraL
10	pUO1_55 (traM)	57992..58432 [+], 441	34500533	conjugal transfer protein TraM

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Sota M; Kawasaki H; Tsuda M (2003). Structure of haloacetate-catabolic IncP-1beta plasmid pUO1 and genetic mobility of its residing haloacetate-catabolic transposon. J Bacteriol. 185(22):6741-5. [PudMed:14594853]