StrainDelftia acidovorans plasmid pUO1 (NC_005088)
Repliconplasmid pUO1 [Browse all T4SS(s) in this replicon]
Location19324..31255; 51403..53849
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components

The information of T4SS components from NC_005088
Region 1: 19324..31255
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pUO1_10 (trfA)16930..18150 [-], 122134500488TrfA 
2pUO1_11 (ssb)18197..18538 [-], 34234500489hypothetical protein 
3pUO1_12 (trbA)18652..19014 [+], 36334500490conjugal transfer protein TrbA 
4pUO1_13 (trbB)19324..20286 [+], 96334500491conjugal transfer ATPase TrbB  TrbB
5pUO1_14 (trbC)20303..20767 [+], 46534500492conjugal transfer protein TrbC  TrbC
6pUO1_15 (trbD)20771..21082 [+], 31234500493conjugal transfer protein TrbD  TrbD
7pUO1_16 (trbE)21079..23637 [+], 255934500494conjugal transfer protein TrbE  TrbE
8pUO1_17 (trbF)23634..24416 [+], 78334500495conjugal transfer protein TrbF  TrbF
9pUO1_18 (trbG)24413..25333 [+], 92134500496conjugal transfer protein TrbG  TrbG
10pUO1_19 (trbH)25336..25824 [+], 48934500497conjugal transfer protein TrbH  TrbH
11pUO1_20 (trbI)25829..27250 [+], 142234500498conjugal transfer protein TrbI  TrbI
12pUO1_21 (trbJ)27271..28035 [+], 76534500499conjugal transfer protein TrbJ  TrbJ
13pUO1_22 (trbK)28045..28272 [+], 22834500500TrbK  TrbK
14pUO1_23 (trbL)28283..30001 [+], 171934500501TrbL  TrbL
15pUO1_24 (trbM)30019..30606 [+], 58834500502conjugal transfer protein TrbM 
16pUO1_25 (trbN)30620..31255 [+], 63634500503conjugal transfer protein TrbN  TrbN
17pUO1_26 (trbO)31284..31550 [+], 26734500504TrbO 
18pUO1_27 (trbP)31550..32509 [+], 96034500505TrbP 
19pUO1_28 (tniA)32382..34064 [+], 168334500506TniA 
20pUO1_29 (tniB)34067..34975 [+], 90934500507TniB 
21pUO1_30 (tniQ)34972..36189 [+], 121834500508TniQ 
Region 2: 51403..53849
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pUO1_46 (traD)48917..49306 [-], 39034500524hypothetical protein 
2pUO1_47 (traE)49328..51391 [-], 206434500525hypothetical protein 
3pUO1_48 (traF)51403..51939 [-], 53734500526conjugal transfer peptidase TraF  TraF
4pUO1_49 (traG)51936..53849 [-], 191434500527conjugal transfer coupling protein TraG  TraG
5pUO1_50 (traI)53846..56086 [-], 224134500528conjugal transfer relaxase TraI 
6pUO1_51 (traH)54148..54540 [-], 39334500529hypothetical protein 
7pUO1_52 (traJ)56121..56495 [-], 37534500530conjugal transfer relaxosome component TraJ 
8pUO1_53 (traK)56869..57267 [+], 39934500531hypothetical protein 
9pUO1_54 (traL)57267..57992 [+], 72634500532conjugal transfer protein TraL 
10pUO1_55 (traM)57992..58432 [+], 44134500533conjugal transfer protein TraM 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Sota M; Kawasaki H; Tsuda M (2003). Structure of haloacetate-catabolic IncP-1beta plasmid pUO1 and genetic mobility of its residing haloacetate-catabolic transposon. J Bacteriol. 185(22):6741-5. [PudMed:14594853]